CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0001s00480
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0001s00480
T201160_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0001s00480.1
GRAS
414
776
LLDQLCKAAELVGTGNFLHAQGILARLNQQLSPTGKPFHRAAFYFKEALQLLLLMNNNSVTAPPPRSPTPFDVIFKMSAYKVLSEVSPLIQFVNFTCNQALLEAVDDADSIHIVDFDIGFGAQWASFMQELPRNRGVRSLKTTAFASPSTHHPVELGLMRDNLTQFANEIGLSFELDVINFDSLEQNCYSLPFFRTNENEAVVVNFPIWCSSNQPSALPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHILHALQSYVHLLESLDAVNATTDAVNKIERFLLQPRIESTVLGRLRAPEKMPNWKTIFASVGFSPVTFSNFTETQAECVVKRTPVRGFHVEKRQALLVLCWQRRELMSASAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000007557
Anas platyrhynchos
ENSAPLG00000007557
N
ENSFALG00000001758
Ficedula albicollis
ENSFALG00000001758
N
SNAPC4
Meleagris gallopavo
ENSMGAG00000007640
N
ENSTGUG00000006303
Taeniopygia guttata
ENSTGUG00000006303
N
Aan_R008822
Calypte anna
Aan_R008822
N
Afo_R013797
Aptenodytes forsteri
Afo_R013797
N
Gfo_R007952
Geospiza fortis
Gfo_R007952
N
Tal_R006578
Tyto alba
Tal_R006578
N