CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0006s08690
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0006s08690
T201201_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0006s08690.1
GRAS
373
744
LRTLLINCAQAIAADDRRSANELLKQIRLHSSPFGDGNRRLAHCFADGLEARLAGTGSQIYKGLVSKRTAAADLLKAYRLYLAACPFRKVSNFVSNKTIKITAENSMRLHVIDFGILYGFQWPTFIHRLSCRPGGPPKLRMTGIEFPQPGFRPAERVEETGRRLAAYAKEFKVPFEYNAIAKKWETIQLEELKIDRDEVVVVNCLYRSKNLLDETVAVDSPRNIVLDLVRKINPEVFIHGITNGAYNAPFYVTRFREALFHFSAMFDMLETIVPREELERLVIERDIFGREALNVIACEGWERVERPETYKQWQVRCLRAGFVQLSFDREIVKQATVKVRQRYHKDFLIDEDSRWLLQGWKGRIIYTLSAWK
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00185p00053620
Amborella trichopoda
AMTR_s00185p00053620
I
Bo3g149640
Brassica oleracea
Bo3g149640
I
scaffold_200704.1
Arabidopsis lyrata
scaffold_200704.1
I
Ocbimv22014894m.g
Octopus bimaculoides
Ocbimv22014894m.g
I
GLYMA05G38430
Glycine max
GLYMA05G38430
N
GLYMA08G01240
Glycine max
GLYMA08G01240
N
MTR_8g099780
Medicago truncatula
MTR_8g099780
N
Ca_05693
Cicer arietinum
Ca_05693
N