CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g086530.1
(
Solanum lycopersicum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Solyc10g086530.1
T201586_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g086530.1.1
GRAS
387
759
LRSLLINCAQAVAADDCRSATELLKQVRLHSSPFGDGNQRLAHCFADGLEARLAGTGSQIYKALVNKRTSAADFLKAYHLYLASCPFRKISGFTSNKTIIRKSKHATRVHIIDFGILYGFQWPTLIQRIAAREGGPPNLRITGIEFPQPGFRPAERIEETGRRLSDYAKSFNVPFEYQAIAKKWETIRVEDLKLEKDEYLVVNCLYRFKNLHDETVLSDSSRTLVLNLIREINPDIFIHGIVNGAYSAPFFVTRFREVLFHFSALFDMLEANVPREFPERLLIEREIFGREALNVIACEGWERVERPETYKQWQVRHLRARFTQTPFEQEEIMNMAVKKVRTSYHKDFIIDQDNKWMLLGWKGRTIYALSCWT
Links
Other
GRAS
family TFs
Other
Solanum lycopersicum
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.138780
Cucumis sativus
Cucsa.138780
N
0.000
evm.TU.supercontig_81.123
Carica papaya
evm.TU.supercontig_81.123
N
0.000