CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc11g012510.1
(
Solanum lycopersicum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Solyc11g012510.1
T201589_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc11g012510.1.1
GRAS
172
542
LKELLDACAEAVSDADISTAEALMSALEQRVSVSGEPMERLGAYVLEGIRARLLSSGSIIYKKLKCKEPTGLELLSYMQVIFNMCPYYKFAYMSANVVINEAMMNENRIHIIDFQIAQGSQWMFLLHYLAHRPGGPPFVRITGVDDDESAYARGGGLQLVGKRLAEVAKSCGVPFEFHGAALSGCEVQLENLRVKHGEALAVNFPYMLHHMPDESVSTINHRDRLLRLVKSLSPKIVTLVEQESNTNTAPFLPRFRETLDYYTAMFESIDAARPRDDKERISAEEHCVARDVVNIIACEGADRVERHELFGKWRLRLMMAGFTQCQLSPSVGETIKHMLKEYSPNYRYAEGEGALYLGWKNRALATSSAWR
Links
Other
GRAS
family TFs
Other
Solanum lycopersicum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_23624
Ancylostoma caninum
ANCCAN_23624
I
0.000
prox1a
Tetraodon nigroviridis
ENSTNIG00000016378
I
0.000
prox1a
Takifugu rubripes
ENSTRUG00000013890
I
0.000
ENSTSYG00000002059
Tarsius syrichta
ENSTSYG00000002059
I
0.000
PROX1
Tursiops truncatus
ENSTTRG00000003405
I
0.000
PROX1
Vicugna pacos
ENSVPAG00000010381
I
0.000
ENSXMAG00000009972
Xiphophorus maculatus
ENSXMAG00000009972
I
0.000
Cmyd_10014540
Chelonia mydas
Cmyd_10014540
I
0.000
prox1.L
Xenopus laevis
XB-GENE-485331
I
0.000
ACOC_0000703501
Angiostrongylus costaricensis
ACOC_0000703501
I
0.000
PROX2
Tupaia belangeri
ENSTBEG00000014423
I
0.000
ANCCAN_24706
Ancylostoma caninum
ANCCAN_24706
I
0.000
ANCCEY_02877
Ancylostoma ceylanicum
ANCCEY_02877
I
0.000
ANCDUO_15205
Ancylostoma duodenale
ANCDUO_15205
I
0.000
CGOC_0000822101
Cylicostephanus goldi
CGOC_0000822101
I
0.000
D918_02805
Trichuris suis
D918_02805
I
0.000
DICVIV_00921
Dictyocaulus viviparus
DICVIV_00921
I
0.000
NECAME_07738
Necator americanus
NECAME_07738
I
0.000
SVUK_0000405601
Strongylus vulgaris
SVUK_0000405601
I
0.000
PROX1
Oryctolagus cuniculus
ENSOCUG00000008274
I
0.000
PROX1
Choloepus hoffmanni
ENSCHOG00000010660
I
0.000
PROX1
Callithrix jacchus
ENSCJAG00000015514
I
0.000
Prox1
Dipodomys ordii
ENSDORG00000007622
I
0.000
PROX1
Echinops telfairi
ENSETEG00000010042
I
0.000
PROX2
Felis catus
ENSFCAG00000028658
I
0.000
ENSLACG00000013691
Latimeria chalumnae
ENSLACG00000013691
I
0.000
ENSMEUG00000013465
Macropus eugenii
ENSMEUG00000013465
I
0.000
PROX1
Microcebus murinus
ENSMICG00000011593
I
0.000
PROX2
Myotis lucifugus
ENSMLUG00000005898
I
0.000
ENSAMEG00000018305
Ailuropoda melanoleuca
ENSAMEG00000018305
I
0.000
PROX1
Ochotona princeps
ENSOPRG00000005115
I
0.000
prox1a
Oryzias latipes
ENSORLG00000014947
I
0.000
ENSPFOG00000003774
Poecilia formosa
ENSPFOG00000003774
I
0.000
ENSPMAG00000006606
Petromyzon marinus
ENSPMAG00000006606
I
0.000
PROX1
Pteropus vampyrus
ENSPVAG00000009067
I
0.000
ENSSHAG00000016547
Sarcophilus harrisii
ENSSHAG00000016547
I
0.000
ENSSTOG00000023253
Ictidomys tridecemlineatus
ENSSTOG00000023253
I
0.000
ENSSTOG00000026238
Ictidomys tridecemlineatus
ENSSTOG00000026238
I
0.000