CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_13295
(
Cicer arietinum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ca_13295
T201883_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGL2
M02031_2.00
Arabidopsis thaliana
NGTACGGHN
NDCCGTACN
PBM
Weirauch et al.(2014)
pTH8681
0.717
0.717
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_13295
GRAS
248
616
LVHTMMACAEAIQQENLKLADALVKHIGLLASSQTGAMRKVASYFAHALGRRIYGSFPEETMDSSFSDVLHMHFYESSPYLKFAHFTANQAILEAFAGAGRVHVVDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHSMLARPGSIEKVLNTVKRIKPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSSNSSSSTGSGSSGQDLLMSELYLGRQICNVVAYEGVDRVERHETLSQWRSRMGAAGFDPVHLGSNAFKQASTLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWK
Links
Other
GRAS
family TFs
Other
Cicer arietinum
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CME102C
Cyanidioschyzon merolae
CME102C
N
0.000
LPERR06G15680
Leersia perrieri
LPERR06G15680
N
0.000
MLOC_70809
Hordeum vulgare
MLOC_70809
N
0.000
SELMODRAFT_107936
Selaginella moellendorffii
SELMODRAFT_107936
N
0.000
SELMODRAFT_405209
Selaginella moellendorffii
SELMODRAFT_405209
N
0.000
SELMODRAFT_415035
Selaginella moellendorffii
SELMODRAFT_415035
N
0.000