CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm008349
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm008349
T201962_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm008349
GRAS
223
594
LVEFLLASAEKVGYQQYERAGKLLNRCDLLSSSTGNSVERVVYYFSEALREKIDRETGRVTPKGLGNRPSFDVNKAMKRPNETSLACQIKIPFGQVAQFAGIQAIVENVAEAKKVHVIDLEIRNGVQWTGLMQALVSRSDCPVELLKISAIGTSSRKLIEETGKRLESFAESMNLPFSFKLVMVPDMLDLKEDMFELDSEETVAVYSEFAMRTMVAQPDRLESAMRVIKKIRPCVTVVTEVEGNHNSPVFVTRFIEALFFFGAYFDCVETCMERNDPNRMILESQYFGNGLRNIVAAEGEERKIRNVKIDVWRAFFARYGMEEIDLSPSSLYQVDLVLKNFSCGSSCTVNMDGKCLLVGWKGTPLQSLSLWK
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LEMA_P028490.1
Leptosphaeria maculans
LEMA_P028490.1
N
Pc21g11080
Penicillium chrysogenum
Pc21g11080
N
e_gw1.00655.2.1
Aspergillus carbonarius
e_gw1.00655.2.1
N
estExt_fgenesh1_pg.C_30009
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_30009
N
W97_01292
Coniosporium apollinis
W97_01292
N
UREG_01500
Uncinocarpus reesii
UREG_01500
N
SNOG_15212
Phaeosphaeria nodorum
SNOG_15212
N
SETTUDRAFT_106070
Setosphaeria turcica
SETTUDRAFT_106070
N
PV09_08801
Verruconis gallopava
PV09_08801
N
PTT_06246
Pyrenophora teres
PTT_06246
N
PTRG_07733
Pyrenophora triticirepentis
PTRG_07733
N
PITC_050900
Penicillium italicum
PITC_050900
N
PDIP_57090
Penicillium digitatum
PDIP_57090
N
PCH_Pc21g11080
Penicillium rubens
PCH_Pc21g11080
N
PABG_00059
Paracoccidioides brasiliensis
PABG_00059
N
PAAG_04696
Paracoccidioides sp lutzii
PAAG_04696
N
AOL_s00007g91
Arthrobotrys oligospora
AOL_s00007g91
N
GSTUM_00003728001
Tuber melanosporum
GSTUM_00003728001
N
EPUS_05648
Endocarpon pusillum
EPUS_05648
N
COCVIDRAFT_38938
Bipolaris victoriae
COCVIDRAFT_38938
N
COCSADRAFT_335315
Bipolaris sorokiniana
COCSADRAFT_335315
N
COCMIDRAFT_7036
Bipolaris oryzae
COCMIDRAFT_7036
N
COCCADRAFT_7074
Bipolaris zeicola
COCCADRAFT_7074
N
COCC4DRAFT_164256
Bipolaris maydis
COCC4DRAFT_164256
N
NFIA_097020
Neosartorya fischeri
CADNFIAG00009216
N
ATEG_00042
Aspergillus terreus
CADATEAG00007804
N
CADAORAG00009979
Aspergillus oryzae
CADAORAG00009979
N
ANIA_01437
Aspergillus nidulans
CADANIAG00008050
N
CADANGAG00013342
Aspergillus niger
CADANGAG00013342
N
AFUA_8G04300
Aspergillus fumigatus
CADAFUAG00003096
N
CADAFLAG00013289
Aspergillus flavus
CADAFLAG00013289
N
ACLA_057650
Aspergillus clavatus
CADACLAG00005620
N