Pm029452 (Prunus mume)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pm029452 T201989_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm029452 GRAS 218 588

Links

Other GRAS family TFs
Other Prunus mume TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.908
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.816
TCM_031132 Theobroma cacao TCM_031132 N 0.886
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.740
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.751
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.743
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.743
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.878
Ca_06943 Cicer arietinum Ca_06943 N 0.846
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.848
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.837
mgf007614m Mimulus guttatus mgf007614m N 0.797
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.791
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.848
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.829
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.840
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.865
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.827
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.851
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.827
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.813
MDP0000205622 Malus domestica MDP0000205622 N 0.921
orange1.1g040563m.g Citrus sinensis orange1.1g040563m.g N 0.875
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.762
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.764
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.824
SapurV1A.0664s0120 Salix purpurea SapurV1A.0664s0120 N 0.805
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.870
PK07026.1 Cannabis sativa PK07026.1 N 0.848
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.751
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.751
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.759
F775_07373 Aegilops tauschii F775_07373 N 0.743
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.873
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.856
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.843
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.837
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.767
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.734
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.756
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.846
OB07G23640 Oryza brachyantha OB07G23640 N 0.759
OBART07G17780 Oryza barthii OBART07G17780 N 0.748
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.751
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.739
OMERI07G14660 Oryza meridionalis OMERI07G14660 N 0.748
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.751
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.753
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.748
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.751
CIGR1 Oryza sativa OS07G0545800 N 0.748
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.829
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.813
POPTR_0001s44090 Populus trichocarpa POPTR_0001s44090 N 0.870
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.854
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.984
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.753
Si029156m.g Setaria italica Si029156m.g N 0.762