CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava1376.valid.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava1376.valid.m1
T202044_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava1376.valid.m1
GRAS
46
470
LIHLLLACANHVAAGSVENANISLEQISHLASADGDTMQRIAAYFTEALADRILRKGWPGLHRALTFTKKSLVSEELLVQRLFFELFPFLKLAYVITNQAIIEAMEGEKMVHIIDLNSFEPAQWIDLLQTLSARPEGPPHLRITGIHEQKEVLDQMALRLTEEAEKLDIPFQFNPIVSKLEDLDIESLRVKTGEALAVSSVLQLHSLLAVDDEILKGNSPSASKNPNPSHFQRALQINKNKRTLGELLEKDLVHVYGASPDSALSPLSLAPSPKMGSFLSALWGLSPKLMVITEQESNHNGFTLMERVTEALNFYAALFDCLESTVSRASVERQKVEKMLFGEEIKNIIACEGTDRKERHEKLEKWILRLELAGFGRVPLSYHGILQASRLLQSYGYDGYKIKEENGCLVICWHSRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M378DRAFT_187599
Amanita muscaria
M378DRAFT_187599
N
0.000
e_gw1.15.51.1
Tremella mesenterica
e_gw1.15.51.1
N
0.000
fgenesh1_pg.C_scaffold_1000144
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_1000144
N
0.000
SCLCIDRAFT_15041
Scleroderma citrinum
SCLCIDRAFT_15041
N
0.000
SCHCODRAFT_74719
Schizophyllum commune
SCHCODRAFT_74719
N
0.000
PLEOSDRAFT_1110570
Pleurotus ostreatus
PLEOSDRAFT_1110570
N
0.000
PISMIDRAFT_670105
Pisolithus microcarpus
PISMIDRAFT_670105
N
0.000
PILCRDRAFT_823319
Piloderma croceum
PILCRDRAFT_823319
N
0.000
PAXRUDRAFT_821096
Paxillus rubicundulus
PAXRUDRAFT_821096
N
0.000
MPER_03261
Moniliophthora perniciosa
MPER_03261
N
0.000
Moror_825
Moniliophthora roreri
Moror_825
N
0.000
M413DRAFT_15049
Hebeloma cylindrosporum
M413DRAFT_15049
N
0.000
M404DRAFT_992985
Pisolithus tinctorius
M404DRAFT_992985
N
0.000
A1Q1_01006
Trichosporon asahii
A1Q1_01006
N
0.000
LACBIDRAFT_305811
Laccaria bicolor
LACBIDRAFT_305811
N
0.000
JAAARDRAFT_31927
Jaapia argillacea
JAAARDRAFT_31927
N
0.000
HETIRDRAFT_432523
Heterobasidion irregulare
HETIRDRAFT_432523
N
0.000
GYMLUDRAFT_75242
Gymnopus luxurians
GYMLUDRAFT_75242
N
0.000
GLOTRDRAFT_136812
Gloeophyllum trabeum
GLOTRDRAFT_136812
N
0.000
GALMADRAFT_269832
Galerina marginata
GALMADRAFT_269832
N
0.000
FOMPIDRAFT_1025229
Fomitopsis pinicola
FOMPIDRAFT_1025229
N
0.000
FIBRA_08487
Fibroporia radiculosa
FIBRA_08487
N
0.000
CY34DRAFT_800522
Suillus luteus
CY34DRAFT_800522
N
0.000
CERSUDRAFT_82708
Ceriporiopsis subvermispora
CERSUDRAFT_82708
N
0.000
CC1G_01048
Coprinopsis cinerea
CC1G_01048
N
0.000
BN946_scf185014.g25
Trametes cinnabarina
BN946_scf185014.g25
N
0.000