CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava34368.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava34368.m1
T202086_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava34368.m1
GRAS
266
637
LWSLLPQCAQAVANNDQRAAKELLRQVRQYSSPFGDGNQRLAHFFVNGLEARLAGTGTPGYTPVVSSTTSAADMLKAYHAYITACPFQTMSYLYASHTIMKLAEKVSRLHIIDFGILYGFQWPSLIERLSTRIGGPPKLCITGIEFPQPGFRPLQRVEETGRRLRKYCERFNVPFEYNPIAQKWETIQYEDLKIDRNEMIVVNCLYRLKNLPDDTMVTNSVRDIVLKLMRRINPDIFIHGVVNGTYNAPFFVTRFREALFHFSALFDMIDATIPREEPERMMFEKEIFGRYAMNVIACEGGERVERPETYKQWQVRNIRAGFRQLPLDQENLKKVIATVKSNYNKNFVVDEDGQWMLQGWKGRIVYALSVWK
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC03G17310
Oryza punctata
OPUNC03G17310
N
TRIUR3_32728
Triticum urartu
TRIUR3_32728
N
Traes_4DL_54206FBF3
Triticum aestivum
Traes_4DL_54206FBF3
N
Traes_4DL_54206FBF31
Triticum aestivum
Traes_4DL_54206FBF31
N
Traes_4BS_AB9EE132F
Triticum aestivum
Traes_4BS_AB9EE132F
N
Traes_4BS_4D4146347
Triticum aestivum
Traes_4BS_4D4146347
N
Traes_4BS_1729D563E
Triticum aestivum
Traes_4BS_1729D563E
N
Traes_1AS_74E6A4EC7
Triticum aestivum
Traes_1AS_74E6A4EC7
N
Si036723m.g
Setaria italica
Si036723m.g
N
OS03G0360600
Oryza sativa
OS03G0360600
N
ORUFI03G18850
Oryza rufipogon
ORUFI03G18850
N
BRADI1G61810
Brachypodium distachyon
BRADI1G61810
N
ONIVA03G19010
Oryza nivara
ONIVA03G19010
N
OMERI03G16300
Oryza meridionalis
OMERI03G16300
N
OGLUM03G18670
Oryza glumaepatula
OGLUM03G18670
N
OBART03G18090
Oryza barthii
OBART03G18090
N
MLOC_6239
Hordeum vulgare
MLOC_6239
N
LPERR03G15750
Leersia perrieri
LPERR03G15750
N
GRMZM2G168665
Zea mays
GRMZM2G168665
N
GRMZM2G157716
Zea mays
GRMZM2G157716
N
F775_14666
Aegilops tauschii
F775_14666
N