CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
cassava40518.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava40518.m1
T202097_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava40518.m1
GRAS
204
574
LAELLLASAEKVSNQQFDRARTLLNQCDHLSSSTGNAVERVVHYFSKALGERIDRETGKMTSQGLGKQQLFNIDEAIMAPTPNILASYQEVPFSQVAHFAGTQAVLENVAEAKRIHVIDLGIRIGVQWTGLMQALVSQSDFSLELLKITAIGTTLKQVIEDTGKRLTSFADSIGLPFSFKIVMVSDILELKEDLFELDADETVVVYCEYLLRSLIPLPDRLDSMMKVIRTLNPTIMVVTEPQFNCTSPYFVNRFIESLFYFSAYFDCLESCMGDDPNRMIVESLHFGEGIRNIVTTEGEERKIQNATLEVWRAFFARFGMEETEMSTSSLYLAELIARKFACGRACTLDLDGKSLLIGWKGTAMHSLSAWK
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_162180
Bipolaris maydis
COCC4DRAFT_162180
N
COCCADRAFT_5836
Bipolaris zeicola
COCCADRAFT_5836
N
COCMIDRAFT_97305
Bipolaris oryzae
COCMIDRAFT_97305
N
COCSADRAFT_157599
Bipolaris sorokiniana
COCSADRAFT_157599
N
PV11_08029
Exophiala sideris
PV11_08029
N
estExt_Genewise1Plus.C_70750
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_70750
N