CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_3590028
(
Physcomitrella patens
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
estExt_Genewise1.C_3590028
T202165_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_3590028
GRAS
1
333
MQRVAHYFMEALVAKMSGTGEQLYTVITNNHPSAATMLKAFRQYVDRCPYIKVGHFFETKMTLDAFEGATRVHIIHYGIQYGVEWPTLIQHLSKRPEGPPHFRITGVDVPYPGEDPCWKIEQTGRRLAEFAKMWNVPFEFHALAGKWESFTARDFNLRSDEVLAVITHRLHNILDVSVLGASPRELLLRRIRSLNPKVFFMFVDNAACNGPFFMTRFRESVKHYSAIFNGMELSFPIDDPERVILEREIFGREILNIVACEGQARVERQEPYRQWQNRLQRAGFTRVHPKQILLSKMKAMMATFHKDYGVGVDDGWILLGIKNQVVRANSFWE
Links
Other
GRAS
family TFs
Other
Physcomitrella patens
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_08101
Aspergillus nidulans
CADANIAG00004133
N
NFIA_039430
Neosartorya fischeri
CADNFIAG00002986
N
PCH_Pc21g15330
Penicillium rubens
PCH_Pc21g15330
N
PEX1_053390
Penicillium expansum
PEX1_053390
N
PITC_049440
Penicillium italicum
PITC_049440
N
U727_0043046281
Penicillium solitum
U727_0043046281
N
Pc21g15330
Penicillium chrysogenum
Pc21g15330
N