CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_005_00234
(
Aquilegia coerulea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Aquca_005_00234
T202237_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_005_00234.1
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.2
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.3
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.4
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.5
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Aquca_005_00234.6
GRAS
171
541
LKQVIIACGKAVSDGDMMAAGWLMGELRKMVSVSGEPIQRLGAYMLEGLVAKLALTGSSIYKALRCKEPTGSELLSYMHILYEVCPYFKFGYLSANGAIAEALKGETRVHIIDFQIAQGSQWISLIQALAARPGGPPHIRITGIDDYTSAYARDGGLHIVGQRLSKLAESFKVPFEFHAGAMSGCEVELETLGVRPGEALAVNFALMLHHMPDESVSTANHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYSAVFESIDVRLPREHKERINVEQHCLAREVVNIIACEGAERVERHEVLGKWKARFRMAGFTPYPLSPVVNATIRNLLENYSEKYRLEEKDGALYLGWMNRALVTSCAWR
Links
Other
GRAS
family TFs
Other
Aquilegia coerulea
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SNOG_12578
Stagonospora nodorum
SNOG_12578
N
0.000
COCC4DRAFT_202082
Bipolaris maydis
COCC4DRAFT_202082
N
0.000
COCCADRAFT_88010
Bipolaris zeicola
COCCADRAFT_88010
N
0.000
COCMIDRAFT_98420
Bipolaris oryzae
COCMIDRAFT_98420
N
0.000
COCSADRAFT_314350
Bipolaris sorokiniana
COCSADRAFT_314350
N
0.000
COCVIDRAFT_111354
Bipolaris victoriae
COCVIDRAFT_111354
N
0.000
LEMA_P059350.1
Leptosphaeria maculans
LEMA_P059350.1
N
0.000
MPH_07157
Macrophomina phaseolina
MPH_07157
N
0.000
PTRG_11331
Pyrenophora triticirepentis
PTRG_11331
N
0.000
PTT_14634
Pyrenophora teres
PTT_14634
N
0.000
PV09_03074
Verruconis gallopava
PV09_03074
N
0.000
SETTUDRAFT_164235
Setosphaeria turcica
SETTUDRAFT_164235
N
0.000
SNOG_12578
Phaeosphaeria nodorum
SNOG_12578
N
0.000
estExt_Genewise1Plus.C_230145
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_230145
N
0.000