CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0001s0019
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.0001s0019
T202306_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0001s0019.1.p
GRAS
43
447
LRRLLFTAADFVSQSNFTAARNLLSILSLNSSPFGDSTQRLAHLFTKALSLRINRLQQEQDPTVATCTTNEMTMSTNSTVFTSSVCKEQFLFRTKNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSSPNSPPPSLRITGCGRDVTGLNRTGDRLTRFANSLGLQFQFHKLVIVDEDLPGLLLQIRLLALSAVQGETIAVNCVHFLYKFFNDDADLIGHFLTVIKSLNPRIVTMAEREANHGDHSFLIRFSEALDHYVAIFDSLEATLPPNSRERLTLEQRWFGKEIMDVVAAEATERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNDSLFLGWQNRLLFSVSSWK
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CGGC5_2205
Colletotrichum gloeosporioides
CGGC5_2205
I
S40288_10288
Stachybotrys chartarum
S40288_10288
I
AFUA_1G08770
Aspergillus fumigatus
CADAFUAG00006945
N
CADANGAG00006322
Aspergillus niger
CADANGAG00006322
N
ANIA_05775
Aspergillus nidulans
CADANIAG00003279
N
FOXG_12744
Fusarium oxysporum
FOXG_12744
N
PAAG_00881
Paracoccidioides sp lutzii
PAAG_00881
N
PCH_Pc21g06560
Penicillium rubens
PCH_Pc21g06560
N
PDIP_41740
Penicillium digitatum
PDIP_41740
N
PGTG_11917
Puccinia graminis
PGTG_11917
N
PTT_04618
Pyrenophora teres
PTT_04618
N
PV09_07855
Verruconis gallopava
PV09_07855
N
Pc21g06560
Penicillium chrysogenum
Pc21g06560
N