CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10024938m.g
(
Capsella rubella
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Carubv10024938m.g
T202368_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10024938m
GRAS
339
713
LRTMLVSCAQAVSINDRRTADDLLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGTQVYTALSSKKTSASDMLKAYQTYISVCPFKKIAIIFANHSIMRLASIANTKTIHIIDFGISYGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETGHRLAKYCEKFHIPFEYNAIAQKWETIKLEDLKLKDGEFVAVNSLFRFRNLLDETVAVHSPRDAVLKLIRKIKPDVFMPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLAREDPMRLMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKDLVQKLKLLVENGYKTKEFDVDQDCNWLLQGWKGRIVYASSVWV
Links
Other
GRAS
family TFs
Other
Capsella rubella
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSONIG00000013583
Oreochromis niloticus
ENSONIG00000013583
N
0.000
ENSONIG00000014709
Oreochromis niloticus
ENSONIG00000014709
N
0.000
ENSORLG00000010025
Oryzias latipes
ENSORLG00000010025
N
0.000
ENSORLG00000012948
Oryzias latipes
ENSORLG00000012948
N
0.000
ENSPFOG00000019374
Poecilia formosa
ENSPFOG00000019374
N
0.000
ENSTRUG00000005618
Takifugu rubripes
ENSTRUG00000005618
N
0.000
ENSXMAG00000003417
Xiphophorus maculatus
ENSXMAG00000003417
N
0.000
Smp_128350
Schistosoma mansoni
Smp_128350
N
0.000
A_20121
Schistosoma haematobium
A_20121
N
0.000