CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene22702-v1.0-hybrid
(
Fragaria vesca
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
gene22702-v1.0-hybrid
T202573_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna22702.1-v1.0-hybrid
GRAS
159
532
LVQLLIACAEAVACRDKSHASALLSELRANALVFGSSFQRVASCFVQGLASRLALVQPLGAVGFVPSKLNAKDYALMDKKEEALRLVYEICPHIQFGHFVANSSILEAFEGESFVHVVDLGMTLGLPHGDQWRGLIHSLTTRAGQPPVSRLRITGVGLCADRLQIIGEELEAYADSLGLSVEFTCVESNLENLKPEDIKLYEGEVLVVNSILQLHCVVKESRGALNSVLQMIHELSPKVLVLVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQGAPIKMMAQAKQWLGKNKVCEGYTVVEEKGCLVLGWKSRPIVAASCWK
Links
Other
GRAS
family TFs
Other
Fragaria vesca
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GALMADRAFT_121449
Galerina marginata
GALMADRAFT_121449
N
GLOTRDRAFT_116858
Gloeophyllum trabeum
GLOTRDRAFT_116858
N
K443DRAFT_670933
Laccaria amethystina
K443DRAFT_670933
N
LACBIDRAFT_297310
Laccaria bicolor
LACBIDRAFT_297310
N
LACBIDRAFT_297375
Laccaria bicolor
LACBIDRAFT_297375
N
M378DRAFT_185569
Amanita muscaria
M378DRAFT_185569
N
M378DRAFT_258233
Amanita muscaria
M378DRAFT_258233
N
PAXINDRAFT_169838
Paxillus involutus
PAXINDRAFT_169838
N
PLEOSDRAFT_1090386
Pleurotus ostreatus
PLEOSDRAFT_1090386
N
fgenesh1_pg.C_scaffold_7000097
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_7000097
N