CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.006G198300
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.006G198300
T202633_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.006G198300.1
GRAS
241
610
SKQTIMEAASAIAEGKTDVANEILTRLAQDSNAKGNSEQRFVACMLLALKSRINSVENPPPVAELFSKEHAAATQLLYDLSPCFKLGFLAANLAILDATRDQPSCNKLHIIDFDIGKGRQYINLLHALSERGSGKPALVKITAIADNGGDERVKMVEDKLSEIAERFGVCMKFNVVASPKLIDLSRESLGCEPDEPLAINFAFNLYRMPDESVSVENQRDELLRRVKGLTPSVVTLVEHEMNTNTAPFTSRVGEASAYYGALFDSIESSVPREKSERVMVEEGLCRKIANSVSCEGRERVERCEVFGKWRARMSMAGFELKPLSESVAESMRARLNSGNRVNPGFTVKEENGGVCFGWMGRTLTVASAWR
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
U727_00431300241
Penicillium solitum
U727_00431300241
I
PVAR5_1235
Byssochlamys spectabilis
PVAR5_1235
I
PITC_007110
Penicillium italicum
PITC_007110
I
PEX1_034110
Penicillium expansum
PEX1_034110
I
PDE_00983
Penicillium oxalicum
PDE_00983
I
PCH_Pc22g10180
Penicillium rubens
PCH_Pc22g10180
I
PABG_00345
Paracoccidioides brasiliensis
PABG_00345
I
PAAG_07780
Paracoccidioides sp lutzii
PAAG_07780
I
HCBG_04788
Histoplasma capsulatum
HCBG_04788
I
fgenesh1_pm.00168_#_532
Aspergillus carbonarius
fgenesh1_pm.00168_#_532
I
EURHEDRAFT_454510
Aspergillus ruber
EURHEDRAFT_454510
I
NFIA_096670
Neosartorya fischeri
CADNFIAG00009220
I
CADAORAG00009941
Aspergillus oryzae
CADAORAG00009941
I
AFUA_8G03970
Aspergillus fumigatus
CADAFUAG00003044
I
CADAFLAG00013329
Aspergillus flavus
CADAFLAG00013329
I
ACLA_057300
Aspergillus clavatus
CADACLAG00005493
I
BDDG_04662
Blastomyces dermatitidis
BDDG_04662
I
Pc22g10180
Penicillium chrysogenum
Pc22g10180
I
MGYG_04981
Microsporum gypseum
MGYG_04981
N
TRV_01064
Trichophyton verrucosum
TRV_01064
N
TESG_03415
Trichophyton tonsurans
TESG_03415
N
TEQG_00252
Trichophyton equinum
TEQG_00252
N
MCYG_07778
Microsporum canis
MCYG_07778
N
H105_06538
Trichophyton soudanense
H105_06538
N
H102_06501
Trichophyton rubrum
H102_06501
N
H101_07154
Trichophyton interdigitale
H101_07154
N
ARB_06400
Arthroderma benhamiae
ARB_06400
N