CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g045079m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g045079m.g
T202956_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g045079m
GRAS
311
596
LRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACLA_082010
Aspergillus clavatus
CADACLAG00007864
I
0.000
AFUA_6G10010
Aspergillus fumigatus
CADAFUAG00002152
I
0.000
CADANGAG00008866
Aspergillus niger
CADANGAG00008866
I
0.000
NFIA_055780
Neosartorya fischeri
CADNFIAG00005300
I
0.000
CHGG_03691
Chaetomium globosum
CHGG_03691
I
0.000
DEHA2E16280g
Debaryomyces hansenii
DEHA2E16280g
I
0.000
EURHEDRAFT_415786
Aspergillus ruber
EURHEDRAFT_415786
I
0.000
PCH_Pc20g15350
Penicillium rubens
PCH_Pc20g15350
I
0.000
PDE_03268
Penicillium oxalicum
PDE_03268
I
0.000
e_gw1.00118.151.1
Aspergillus carbonarius
e_gw1.00118.151.1
I
0.000
gw1.00129.183.1
Aspergillus carbonarius
gw1.00129.183.1
I
0.000
Pc20g15350
Penicillium chrysogenum
Pc20g15350
I
0.000