CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Aa00944
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Aa00944
T202967_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Aa00944.1.p
GRAS
252
617
LRQLLSEDAAAMADGDRATAAAHLAALKTAANPRGDAEQRLVAMMAAALSSRNSPPSSQQLADLCGAELRAACQLLHDVSPCFGLALHGANLAILDAVAGQRVIHLIDFDVSLAQHIALIHALASRRVAGICLKVTAVADPTSPFTPALAQALAATGQRLQRHAQQAGLEFRFNAVSCRPSEVDALRLGCEPGEAVAVNLAFALSRVPDESVSPANPRDELLRRVRALGPRVVALAEQELNTNTAPLAARFANACAHYGAVLESLDATLARDSAQRARAEAALAGKVANAVAREGPDRLERCEVFGKWRARFGMAGLRPLAIGQGVADRVKARLGHARPGFDVKLESGRLGVGWMGRVVTVASAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_00994
Capronia epimyces
A1O3_00994
N
A1O7_00670
Cladophialophora yegresii
A1O7_00670
N
EPUS_05676
Endocarpon pusillum
EPUS_05676
N
HMPREF1541_09414
Cyphellophora europaea
HMPREF1541_09414
N
PV04_01365
Capronia semiimmersa
PV04_01365
N
PV05_11702
Exophiala xenobiotica
PV05_11702
N
PV06_03374
Exophiala oligosperma
PV06_03374
N
PV07_09897
Cladophialophora immunda
PV07_09897
N
PV08_05400
Exophiala spinifera
PV08_05400
N
PV10_08953
Exophiala mesophila
PV10_08953
N
PV11_06758
Exophiala sideris
PV11_06758
N
Z517_08089
Fonsecaea pedrosoi
Z517_08089
N
Z518_04201
Rhinocladiella mackenziei
Z518_04201
N
Z519_10820
Cladophialophora bantiana
Z519_10820
N