CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ia01446
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ia01446
T203022_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ia01446.1.p
GRAS
337
707
LRTLLIHCAQAVSVNNHTLASDILSIIRQHASTSGDDSQRLAFCLADCLEVRLAGTGSQLYHKLMAKRRNAVDILKVFNLSIAICPFLRAPYYFSNKTIIDVSKGKPQVHIIDFGICFGFQWPSLFEQLAKREGGPPKVRITGIEQPQPGFRPNESSRNAGQRLADYASMFNISFEYQGISSKWETIKIDDFNIEKDDVLIVNCIYRLKNLADETVSINSARNRVLNTIRTMKPKVFIHGVVNGSYSTPFFLTRFKEVMYHYSALFDIIDKTLPRDDEARMILERDIYLPVVLNVIACEGSERIERPESYKKWKLRNKKAGFEQLPLNPDTVKGTRAMVKQYHKDFVTNEDDQWLLLGWKGRILYGIATWK
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_168850
Schistosoma mansoni
Smp_168850
N
A_02839
Schistosoma haematobium
A_02839
N
csin112927
Clonorchis sinensis
csin112927
N
SCUD_0002209801
Schistosoma curassoni
SCUD_0002209801
N
SMRZ_0001319101
Schistosoma margrebowiei
SMRZ_0001319101
N
SMTD_0001364401
Schistosoma mattheei
SMTD_0001364401
N
SROB_0001700901
Schistosoma rodhaini
SROB_0001700901
N
T265_03747
Opisthorchis viverrini
T265_03747
N