CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib01878
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ib01878
T203031_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib01878.1.p
GRAS
1
390
MWMLNELASPYGDVDQKLASYFLQGLFARLTSSGPRTLRTLAAASDRNASFESTRRTALKFQELSPWASFGHVAANGAILEAFLEAAAAAASSSSSQPPRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPAAAPASAAAQRVMREITQRLEKFARLMGVPFSFRAVHHAGDLAELDLDGLDLREGGATTALAVNCVNALRGVAPGGARRRDAFVASLRRLEPRVVTVVEEDADLVPPDPGAASTSEEAGADDAAAFMKVFEEGLRFFSAYMDSLEESFPKASNERLALERAAGRAIVDLVSCPASESAERRETGASWARRMRSAGFSPVAFSDDVADDVRSLLRRYREGWTLQEPGTDDAAAAGVFLAWKEQPVVWTSAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_04521
Aspergillus nidulans
CADANIAG00005920
D
CADAFLAG00007177
Aspergillus flavus
CADAFLAG00007177
I
CADAORAG00008667
Aspergillus oryzae
CADAORAG00008667
I
ATEG_09589
Aspergillus terreus
CADATEAG00004698
I
PDIP_71980
Penicillium digitatum
PDIP_71980
I
PEX1_062640
Penicillium expansum
PEX1_062640
I
PITC_026200
Penicillium italicum
PITC_026200
I
PVAR5_1968
Byssochlamys spectabilis
PVAR5_1968
I
U727_00430521301
Penicillium solitum
U727_00430521301
I
Pc18g04130
Penicillium chrysogenum
Pc18g04130
I