CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J35282
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J35282
T203091_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J35282.1.p
GRAS
212
583
LHTLLLHCAKAVIDNRRSADELLKQIKDHASPTGDATQRLAYCFAQGLEARLAGTGSQVYRSLTADRTPLLEFLKAYQLFMSTCCFRKVAFHFANKAIFDVAIGRSKLHIVDYGLHSGFQWPELLRLLGARDGGPPEVRITSIDLPQPGFRPANHIAEMGHHLSNCARQLCVPLKFGAVVAQWHTISIDDLNVEPDEVIVINDLFNFRTLMDESVVTDRSSPRDVVLSNIAKMKPDVFVQGIINGSYGTFFLSRFREALFYHSAMFDMLDATMPRESRLRLVLERDIFGWVALNAIACEGEDRLERGETYKQWQIRNRRAGLRQLPLNRESVNMVRNIVKNQYHKDFVIEEDQQWLLQGWKGRILLAHSMWV
Pavir.J35282.2.p
GRAS
212
583
LHTLLLHCAKAVIDNRRSADELLKQIKDHASPTGDATQRLAYCFAQGLEARLAGTGSQVYRSLTADRTPLLEFLKAYQLFMSTCCFRKVAFHFANKAIFDVAIGRSKLHIVDYGLHSGFQWPELLRLLGARDGGPPEVRITSIDLPQPGFRPANHIAEMGHHLSNCARQLCVPLKFGAVVAQWHTISIDDLNVEPDEVIVINDLFNFRTLMDESVVTDRSSPRDVVLSNIAKMKPDVFVQGIINGSYGTFFLSRFREALFYHSAMFDMLDATMPRESRLRLVLERDIFGWVALNAIACEGEDRLERGETYKQWQIRNRRAGLRQLPLNRESVNMVRNIVKNQYHKDFVIEEDQQWLLQGWKGRILLAHSMWV
Pavir.J35282.3.p
GRAS
212
583
LHTLLLHCAKAVIDNRRSADELLKQIKDHASPTGDATQRLAYCFAQGLEARLAGTGSQVYRSLTADRTPLLEFLKAYQLFMSTCCFRKVAFHFANKAIFDVAIGRSKLHIVDYGLHSGFQWPELLRLLGARDGGPPEVRITSIDLPQPGFRPANHIAEMGHHLSNCARQLCVPLKFGAVVAQWHTISIDDLNVEPDEVIVINDLFNFRTLMDESVVTDRSSPRDVVLSNIAKMKPDVFVQGIINGSYGTFFLSRFREALFYHSAMFDMLDATMPRESRLRLVLERDIFGWVALNAIACEGEDRLERGETYKQWQIRNRRAGLRQLPLNRESVNMVRNIVKNQYHKDFVIEEDQQWLLQGWKGRILLAHSMWV
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_43730
Hordeum vulgare
MLOC_43730
N
0.742
OB11G28110
Oryza brachyantha
OB11G28110
N
0.774
Traes_4AL_F023A8691
Triticum aestivum
Traes_4AL_F023A8691
N
0.734
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.775
Traes_4DS_2B4E99BE4
Triticum aestivum
Traes_4DS_2B4E99BE4
N
0.712
Traes_4DS_82065CB2C
Triticum aestivum
Traes_4DS_82065CB2C
N
0.745
TRIUR3_05949
Triticum urartu
TRIUR3_05949
N
0.704
TRIUR3_08697
Triticum urartu
TRIUR3_08697
N
0.712
Pavir.J13478
Panicum virgatum
Pavir.J13478
N
0.821