CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J39953
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J39953
T203099_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J39953.1.p
GRAS
96
461
SRQLLSEAAAAMADGDRAAAAAHLAALKTAANPRGDAEQRLVAMMAAAMSSRIGSPSSQQLADLCGAEQRAACHLLHDVSPCFGLALHGANLAILDAVAGQRVIHLIDFDVSLAQHIALIHALANRRVAGTCLKLTAVADPTSPFTPALAQALAATGQRLQRHAQQAGLEFRFNAVSCRPGEVDASRLGCEPGEAVAVNLAFALSRVPDESVSPANPRDELLRRVRALGPRVVALVEQELNTNTAPLAARFADACAHYGAVLESLDATLARDSVQRARAEAALAGKAANAVAREGPDRLERCEVFGKWRARFGMAGLRPLAIGQGVADRVKARLGHARPGFDVKLEGGRLGVGWMGRVVTVASAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WUBG_03267
Wuchereria bancrofti
WUBG_03267
N
0.000
Bm5193
Brugia malayi
Bm5193
N
0.000
LOAG_18198
Loa loa
LOAG_18198
N
0.000
WBGene00240603
Onchocerca volvulus
WBGene00240603
N
0.000
BTMF_0001049501
Brugia timori
BTMF_0001049501
N
0.000
nAv.1.0.1.g03519
Acanthocheilonema viteae
nAv.1.0.1.g03519
N
0.000
nDi.2.2.2.g04995
Dirofilaria immitis
nDi.2.2.2.g04995
N
0.000
nLs.2.1.2.g08650
Litomosoides sigmodontis
nLs.2.1.2.g08650
N
0.000
OFLC_0001389501
Onchocerca flexuosa
OFLC_0001389501
N
0.000
TCLT_0000614701
Thelazia callipaeda
TCLT_0000614701
N
0.000