CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_084059.1
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjSGA_084059.1
T203312_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_084059.1
GRAS
3
335
TRAFSSLLCHGLETRLSAGTPSYKCGLDEATAADMLKAYKLFVTSSPLQRMSNLLTTKTILKLVKNESSVHIIDFGICYGFQWPCLIKSLSERHGGPPRLRVTGIELPRPGFRPAERVEETGRRLENYCKKFKVPFEYNCLAKKWETIKLEDLKTDKTEITVVNCLYRMKNLPDEIENVNCPRDVLLKLIRKINPNIFIHGIVNGTYNAPFFLTRFREALFHFSSLFDMFEANVDREDPQRVMLEKALFGRDAINVIACEGAERVERPETYKQWQIRNRRAGFKQVRLDPELVKQAKAMVKREYHKDFVVDEDGKWVLQGWKGRILNAISAWV
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI5G08027
Brachypodium distachyon
BRADI5G08027
N
F775_33065
Aegilops tauschii
F775_33065
N
LPERR04G07290
Leersia perrieri
LPERR04G07290
N
OBART04G10400
Oryza barthii
OBART04G10400
N
OGLUM04G10090
Oryza glumaepatula
OGLUM04G10090
N
OMERI04G09520
Oryza meridionalis
OMERI04G09520
N
ONIVA04G08280
Oryza nivara
ONIVA04G08280
N
ONIVA04G08300
Oryza nivara
ONIVA04G08300
N
OPUNC04G08530
Oryza punctata
OPUNC04G08530
N
ORGLA02G0342800
Oryza glaberrima
ORGLA02G0342800
N
ORGLA02G0353300
Oryza glaberrima
ORGLA02G0353300
N
ORGLA04G0074800
Oryza glaberrima
ORGLA04G0074800
N
Traes_2BL_ABBC40952
Triticum aestivum
Traes_2BL_ABBC40952
N
Traes_2DL_3C9A3DD05
Triticum aestivum
Traes_2DL_3C9A3DD05
N
TRIUR3_28009
Triticum urartu
TRIUR3_28009
N