CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjSGA_122341.1
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjSGA_122341.1
T203317_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjSGA_122341.1
GRAS
5
182
LVHMLLACAEAVGCRDTQQAEFLLSRIWALASPSGDSLQRVSYCFATGLKCRLLLLPQSAIANGTFTRSSMNVPLITRENKLEAFHLLYQTTPYIAFGFMAANEAIFQASKGKSSIHIVDLGMEHTLQWPSLIRALVSRPEGPPKLRITGLIRIEDNNPKLQTRINALLEEASSLGMP
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSSHAG00000018686
Sarcophilus harrisii
ENSSHAG00000018686
N
TTF1
Oryctolagus cuniculus
ENSOCUG00000005633
N
TTF1
Otolemur garnettii
ENSOGAG00000009611
N
TTF1
Ochotona princeps
ENSOPRG00000007202
N
TTF1
Procavia capensis
ENSPCAG00000013797
N
ENSPPYG00000019709
Pongo abelii
ENSPPYG00000019709
N
TTF1
Pan troglodytes
ENSPTRG00000021496
N
TTF1
Pteropus vampyrus
ENSPVAG00000002038
N
Ttf1
Rattus norvegicus
ENSRNOG00000039777
N
ENSOARG00000006189
Ovis aries
ENSOARG00000006189
N
ENSSTOG00000007957
Ictidomys tridecemlineatus
ENSSTOG00000007957
N
TTF1
Tursiops truncatus
ENSTTRG00000014081
N
Afo_R001646
Aptenodytes forsteri
Afo_R001646
N
ENSP00000333920-D1
Bos grunniens
ENSP00000333920-D1
N
ENSP00000333920
Macaca fascicularis
ENSP00000333920
N
Gfo_R008001
Geospiza fortis
Gfo_R008001
N
Myotis_brandtii_TTF1_10010133
Myotis brandtii
Myotis_brandtii_TTF1_10010133
N
TTF1
Homo sapiens
ENSG00000125482
N
TTF1
Bos taurus
ENSBTAG00000018710
N
TTF1
Canis familiaris
ENSCAFG00000019895
N
TTF1
Callithrix jacchus
ENSCJAG00000018230
N
ENSCPOG00000021944
Cavia porcellus
ENSCPOG00000021944
N
ENSCSAG00000014926
Chlorocebus sabaeus
ENSCSAG00000014926
N
TTF1
Dasypus novemcinctus
ENSDNOG00000014161
N
ENSECAG00000026979
Equus caballus
ENSECAG00000026979
N
TTF1
Felis catus
ENSFCAG00000007103
N
ENSAMEG00000004093
Ailuropoda melanoleuca
ENSAMEG00000004093
N
TTF1
Gorilla gorilla
ENSGGOG00000008285
N
TTF1
Loxodonta africana
ENSLAFG00000001119
N
TTF1
Myotis lucifugus
ENSMLUG00000004861
N
TTF1
Macaca mulatta
ENSMMUG00000006833
N
TTF1
Monodelphis domestica
ENSMODG00000012538
N
ENSMPUG00000012536
Mustela putorius furo
ENSMPUG00000012536
N
ENSNLEG00000012847
Nomascus leucogenys
ENSNLEG00000012847
N