CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LjT40K11.90.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
LjT40K11.90.nc
T203326_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LjT40K11.90.nc
GRAS
223
585
LVHALMACAEAVQKENHKLADTLVKHIGVVAASQAGAMRKVASYFAQALARRIYGIFPDTVDSSLNDVLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVVDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNSDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSIDKVMGTIKKLNPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGAASTGSDSSGQDVVMTEVYLGEQICNVVACEGVDRVERHETLVQWRTRMGSAGFNPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWK
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G33740
Brachypodium distachyon
BRADI4G33740
N
0.000
GRMZM2G000842
Zea mays
GRMZM2G000842
N
0.000
MLOC_68986
Hordeum vulgare
MLOC_68986
N
0.000
Si022106m.g
Setaria italica
Si022106m.g
N
0.000
Traes_5AL_39649C38E
Triticum aestivum
Traes_5AL_39649C38E
N
0.000
Traes_5BL_C08428870
Triticum aestivum
Traes_5BL_C08428870
N
0.000
Traes_5DL_1950C1FC2
Triticum aestivum
Traes_5DL_1950C1FC2
N
0.000
Pavir.J08325
Panicum virgatum
Pavir.J08325
N
0.000