CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CLUG_04271
(
Candida lusitaniae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
CLUG_04271
T203647_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
YOX1
M00058_2.00
Saccharomyces cerevisiae
HTWAATTR
YAATTWAD
PBM
Badis et al.(2008)
YOX1_2073
0.748
0.614
YOX1
M01552_2.00
Saccharomyces cerevisiae
BWWATDR
YHATWWV
PBM
Zhu et al.(2009)
Yox1
0.748
0.614
YOX1
M07487_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1
0.748
0.614
YOX1
M08575_2.00
Saccharomyces cerevisiae
YTAATTWN
NWAATTAR
Misc
DeBoer et al.(2011)
YML027W_498
0.748
0.614
YHP1
M02191_2.00
Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN
PBM
Weirauch et al.(2014)
pTH6381
0.730
0.561
YHP1
M08423_2.00
Saccharomyces cerevisiae
TAATTG
CAATTA
ChIP-chip
Mathelier et al.(2014)
MA0426.1
0.730
0.561
YHP1
M08573_2.00
Saccharomyces cerevisiae
WNTAATTR
YAATTANW
Misc
DeBoer et al.(2011)
YDR451C_716
0.730
0.561
YHP1
M10797_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$YHP1_01
0.730
0.561
yox1
M02174_2.00
Schizosaccharomyces pombe
NNHHATDDNN
NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6057
0.685
0.509
ATEG_04171
M02059_2.00
Aspergillus terreus
BWWATKRNNN
NNNYMATWWV
PBM
Weirauch et al.(2014)
pTH5871
0.637
0.544
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLUT_04271
Homeodomain
158
214
RRKRRRTSPHELAILNQEFQAGSTPNKTRRIEIAKKVSMTEKAIQIWFQNKRQSLRR
Links
Other
Homeodomain
family TFs
Other
Candida lusitaniae
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-pag1_scaffold_1127-snap-gene-0.1
Pythium aphanidermatum
maker-pag1_scaffold_1127-snap-gene-0.1
I
SPRG_00136
Saprolegnia parasitica
SPRG_00136
N
SPRG_01018
Saprolegnia parasitica
SPRG_01018
N
SPRG_04538
Saprolegnia parasitica
SPRG_04538
N
SPRG_09686
Saprolegnia parasitica
SPRG_09686
N
ALNC14_040540
Albugo laibachii
ALNC14_040540
N
ALNC14_040550
Albugo laibachii
ALNC14_040550
N
ALNC14_040560
Albugo laibachii
ALNC14_040560
N
ALNC14_040570
Albugo laibachii
ALNC14_040570
N
ALNC14_040580
Albugo laibachii
ALNC14_040580
N
ALNC14_040590
Albugo laibachii
ALNC14_040590
N
ALNC14_040600
Albugo laibachii
ALNC14_040600
N
ALNC14_040610
Albugo laibachii
ALNC14_040610
N
ALNC14_040620
Albugo laibachii
ALNC14_040620
N
ALNC14_040630
Albugo laibachii
ALNC14_040630
N
ALNC14_040640
Albugo laibachii
ALNC14_040640
N
ALNC14_040650
Albugo laibachii
ALNC14_040650
N
ALNC14_040660
Albugo laibachii
ALNC14_040660
N
ALNC14_040670
Albugo laibachii
ALNC14_040670
N
ALNC14_040680
Albugo laibachii
ALNC14_040680
N
ALNC14_040690
Albugo laibachii
ALNC14_040690
N
ALNC14_040700
Albugo laibachii
ALNC14_040700
N
ALNC14_040710
Albugo laibachii
ALNC14_040710
N
ALNC14_040720
Albugo laibachii
ALNC14_040720
N
ALNC14_040730
Albugo laibachii
ALNC14_040730
N
ALNC14_040740
Albugo laibachii
ALNC14_040740
N
ALNC14_040750
Albugo laibachii
ALNC14_040750
N
ALNC14_040760
Albugo laibachii
ALNC14_040760
N
ALNC14_040770
Albugo laibachii
ALNC14_040770
N
ALNC14_040780
Albugo laibachii
ALNC14_040780
N
ALNC14_040790
Albugo laibachii
ALNC14_040790
N
ALNC14_040800
Albugo laibachii
ALNC14_040800
N
ALNC14_040810
Albugo laibachii
ALNC14_040810
N
ALNC14_040820
Albugo laibachii
ALNC14_040820
N
ALNC14_040830
Albugo laibachii
ALNC14_040830
N
ALNC14_040840
Albugo laibachii
ALNC14_040840
N
ALNC14_066630
Albugo laibachii
ALNC14_066630
N
ALNC14_090760
Albugo laibachii
ALNC14_090760
N
ALNC14_110220
Albugo laibachii
ALNC14_110220
N
ALNC14_122900
Albugo laibachii
ALNC14_122900
N
F443_03190
Phytophthora parasitica
F443_03190
N
F443_06409
Phytophthora parasitica
F443_06409
N
F443_15811
Phytophthora parasitica
F443_15811
N
F443_18702
Phytophthora parasitica
F443_18702
N
F443_18703
Phytophthora parasitica
F443_18703
N
fgenesh-pir_contig_580-abinit-gene-0.31
Pythium irregulare
fgenesh-pir_contig_580-abinit-gene-0.31
N
fgenesh_scip_prom.28083.4437
Phytophthora lateralis
fgenesh_scip_prom.28083.4437
N
fgenesh_scip_prom.28083.4438
Phytophthora lateralis
fgenesh_scip_prom.28083.4438
N
fgenesh_scip_prom.28083.520
Phytophthora lateralis
fgenesh_scip_prom.28083.520
N
fgenesh_scip_prom.46568.1669
Phytophthora kernoviae
fgenesh_scip_prom.46568.1669
N
fgenesh_scip_prom.46568.3588
Phytophthora kernoviae
fgenesh_scip_prom.46568.3588
N
fgenesh_scip_prom.46568.7094
Phytophthora kernoviae
fgenesh_scip_prom.46568.7094
N
fgenesh_scip_prom.46568.8092
Phytophthora kernoviae
fgenesh_scip_prom.46568.8092
N
fgenesh_scip_prom.46568.8093
Phytophthora kernoviae
fgenesh_scip_prom.46568.8093
N
HpaG802951
Hyaloperonospora arabidopsidis
HpaG802951
N
HpaG802952
Hyaloperonospora arabidopsidis
HpaG802952
N
HpaG808860
Hyaloperonospora arabidopsidis
HpaG808860
N
HpaG810973
Hyaloperonospora arabidopsidis
HpaG810973
N
maker-pag1_scaffold_183-snap-gene-0.28
Pythium aphanidermatum
maker-pag1_scaffold_183-snap-gene-0.28
N
maker-pag1_scaffold_287-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_287-snap-gene-0.16
N
maker-pag1_scaffold_440-fgenesh-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_440-fgenesh-gene-0.4
N
maker-par_contig_1213-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_1213-fgenesh-gene-0.0
N
maker-par_contig_1213-fgenesh-gene-0.2
Pythium arrhenomanes
maker-par_contig_1213-fgenesh-gene-0.2
N
maker-par_contig_6535-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_6535-fgenesh-gene-0.0
N
maker-par_contig_654-snap-gene-0.10
Pythium arrhenomanes
maker-par_contig_654-snap-gene-0.10
N
maker-pir_contig_294-snap-gene-0.10
Pythium irregulare
maker-pir_contig_294-snap-gene-0.10
N
maker-pir_contig_551-fgenesh-gene-0.4
Pythium irregulare
maker-pir_contig_551-fgenesh-gene-0.4
N
maker-pir_contig_698-fgenesh-gene-0.1
Pythium irregulare
maker-pir_contig_698-fgenesh-gene-0.1
N
maker-pir_contig_85-snap-gene-0.26
Pythium irregulare
maker-pir_contig_85-snap-gene-0.26
N
maker-piw_contig_207-snap-gene-0.13
Pythium iwayamai
maker-piw_contig_207-snap-gene-0.13
N
maker-piw_contig_3132-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_3132-fgenesh-gene-0.1
N
maker-pve_contig_402-snap-gene-0.22
Pythium vexans
maker-pve_contig_402-snap-gene-0.22
N
maker-pve_contig_635-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_635-fgenesh-gene-0.0
N
maker-pve_contig_642-fgenesh-gene-0.1
Pythium vexans
maker-pve_contig_642-fgenesh-gene-0.1
N
maker-pve_contig_642-fgenesh-gene-0.5
Pythium vexans
maker-pve_contig_642-fgenesh-gene-0.5
N
Phyra73275
Phytophthora ramorum
Phyra73275
N
Phyra80975
Phytophthora ramorum
Phyra80975
N
Phyra84925
Phytophthora ramorum
Phyra84925
N
Phyra95869
Phytophthora ramorum
Phyra95869
N
Physo129725
Phytophthora sojae
Physo129725
N
Physo129726
Phytophthora sojae
Physo129726
N
Physo131272
Phytophthora sojae
Physo131272
N
Physo134017
Phytophthora sojae
Physo134017
N
Physo134018
Phytophthora sojae
Physo134018
N
Physo144764
Phytophthora sojae
Physo144764
N
PITG_05353
Phytophthora infestans
PITG_05353
N
PITG_11760
Phytophthora infestans
PITG_11760
N
PITG_14513
Phytophthora infestans
PITG_14513
N
PITG_14514
Phytophthora infestans
PITG_14514
N
PITG_20646
Phytophthora infestans
PITG_20646
N
PITG_20647
Phytophthora infestans
PITG_20647
N
PITG_22459
Phytophthora infestans
PITG_22459
N
PYU1_G003405
Pythium ultimum
PYU1_G003405
N
PYU1_G007450
Pythium ultimum
PYU1_G007450
N
PYU1_G009787
Pythium ultimum
PYU1_G009787
N
PYU1_G013874
Pythium ultimum
PYU1_G013874
N
PYU1_G013875
Pythium ultimum
PYU1_G013875
N
snap_masked-pve_contig_472-abinit-gene-0.36
Pythium vexans
snap_masked-pve_contig_472-abinit-gene-0.36
N
e_gw1.457.7.1
Phytophthora capsici
e_gw1.457.7.1
N
estExt_fgenesh1_kg.C_10721
Phytophthora capsici
estExt_fgenesh1_kg.C_10721
N
estExt_fgenesh1_kg.C_21048
Phytophthora capsici
estExt_fgenesh1_kg.C_21048
N
estExt_fgenesh1_kg.C_21051
Phytophthora capsici
estExt_fgenesh1_kg.C_21051
N
estExt_fgenesh1_pg.C_230105
Phytophthora capsici
estExt_fgenesh1_pg.C_230105
N