ATHB-9 (Arabidopsis thaliana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AT1G30490 T204456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M02682_2.00		 Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1		 (Direct) (Direct)
ATHB-9
M06898_2.00		 Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a		 (Direct) (Direct)
ATHB-9
M10623_2.00		 Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.861 0.911
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.861 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G30490.1 Homeodomain 20 79

Links

Other Homeodomain family TFs
Other Arabidopsis thaliana TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AOL_s00054g326 Arthrobotrys oligospora AOL_s00054g326 I 0.000
DRE_01415 Drechslerella stenobrocha DRE_01415 I 0.000
H072_1719 Dactylellina haptotyla H072_1719 I 0.000
PV04_02016 Capronia semiimmersa PV04_02016 N 0.000
Z518_07944 Rhinocladiella mackenziei Z518_07944 N 0.000
Z517_08888 Fonsecaea pedrosoi Z517_08888 N 0.000
PV11_07856 Exophiala sideris PV11_07856 N 0.000
PV10_09038 Exophiala mesophila PV10_09038 N 0.000
PV08_06067 Exophiala spinifera PV08_06067 N 0.000
PV07_12748 Cladophialophora immunda PV07_12748 N 0.000
PV07_10758 Cladophialophora immunda PV07_10758 N 0.000
PV06_03658 Exophiala oligosperma PV06_03658 N 0.000
PV05_10912 Exophiala xenobiotica PV05_10912 N 0.000
A1O1_01039 Capronia coronata A1O1_01039 N 0.000
HMPREF1541_09623 Cyphellophora europaea HMPREF1541_09623 N 0.000
G647_00094 Cladophialophora carrionii G647_00094 N 0.000
A1O9_13137 Exophiala aquamarina A1O9_13137 N 0.000
A1O7_00084 Cladophialophora yegresii A1O7_00084 N 0.000
A1O5_04221 Cladophialophora psammophila A1O5_04221 N 0.000
A1O3_07515 Capronia epimyces A1O3_07515 N 0.000