CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGIBMGA010300
(
Bombyx mori
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
BGIBMGA010300
T204644_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pou1f1
M02238_2.00
Mus musculus
NTAATKHNN
NNDMATTAN
PBM
Weirauch et al.(2014)
pTH6507
0.640
0.526
acj6
M02241_2.00
Drosophila melanogaster
VTMATTAA
TTAATKAB
PBM
Weirauch et al.(2014)
pTH6053
0.632
0.491
POU6F1
M02094_2.00
Homo sapiens
VNTAATTANB
VNTAATTANB
PBM
Weirauch et al.(2014)
pTH6519
0.621
0.491
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIBMGA010300-TA
Homeodomain
126
182
RKKRTSIESGVRVALEKAFLHNPKPTSEEIAALADSLCMEKEVVRVWFCNRRQKVQQ
Links
Other
Homeodomain
family TFs
Other
Bombyx mori
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DILT_0001004901
Diphyllobothrium latum
DILT_0001004901
N
EmuJ_000419500
Echinococcus multilocularis
EmuJ_000419500
N
HDID_0000507901
Hymenolepis diminuta
HDID_0000507901
N
HmN_000865600
Hymenolepis microstoma
HmN_000865600
N
MCOS_0000070201
Mesocestoides corti
MCOS_0000070201
N
SMTD_0001467001
Schistosoma mattheei
SMTD_0001467001
N
SSLN_0000810201
Schistocephalus solidus
SSLN_0000810201
N
TsM_000321300
Taenia solium
TsM_000321300
N
TTAC_0000046901
Hydatigera taeniaeformis
TTAC_0000046901
N