CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Bo9g104880 *(Brassica oleracea)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	Bo9g104880	T205004_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HDG7 M06931_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) HDG7_col_a	0.637	0.877
HDG7 M10629_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$HDG7_01	0.637	0.877
ANL2 M02046_2.00	Arabidopsis thaliana	NCATTWATKNN	NNMATWAATGN	PBM Weirauch et al.(2014) pTH8244	0.612	0.719
ANL2 M06919_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) ANL2_col_a	0.612	0.719
ANL2 M06920_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) ANL2_colamp_a	0.612	0.719
HDG1 M06917_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) HDG1_col100_a	0.607	0.649
HDG1 M06918_2.00	Arabidopsis thaliana	DCATTAAWTRH	DYAWTTAATGH	Dap-seq OMalley et al.(2016) HDG1_colamp_a	0.607	0.649
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Bo9g104880.1	Homeodomain	41	97	MSKYRRHTSYQIQELESFFKVCPHPNEKQRLELGSKLSLEGKQIKFWFQNRRTQMKT

Links
Other Homeodomain family TFs
Other *Brassica oleracea* TFs

151 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CY34DRAFT_799479	Suillus luteus	CY34DRAFT_799479	N
GLOTRDRAFT_118924	Gloeophyllum trabeum	GLOTRDRAFT_118924	N
M378DRAFT_479088	Amanita muscaria	M378DRAFT_479088	N
M408DRAFT_21206	Serendipita vermifera	M408DRAFT_21206	N
MYCTH_2305929	Myceliophthora thermophila	MYCTH_2305929	N
PILCRDRAFT_817377	Piloderma croceum	PILCRDRAFT_817377	N