ENSAMEG00000016625 (Ailuropoda melanoleuca)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSAMEG00000016625 T206969_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PBX3
M08132_2.00 		Homo sapiens
NNNTGAGTGACAGSNNN
NNNSCTGTCACTCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1114.1 		0.820 0.868
PBX3
M07971_2.00 		Homo sapiens
NNBDRCCAATSRVVD
HBBYSATTGGYHVNN		 ChIP-seq
Gerstein et al.(2012)
GM12878_PBX3_HudsonAlpha 		0.820 0.868
PBX3
M09155_2.00 		Homo sapiens
DGABKGRCRGB
VCYGYCMVTCH		 Misc
Kulakovskiy et al.(2013)
PBX3_HUMAN.H11MO.0.A 		0.820 0.868
PBX3
M09560_2.00 		Homo sapiens
NTGABTGACAGB
VCTGTCAVTCAN		 Misc
Heinz et al.(2010)
GM12878-PBX3_GSE32465 		0.820 0.868
PBX3
M10732_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX3_02 		0.820 0.868
PBX3
M10733_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX3_03 		0.820 0.868
PBX3
M10734_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX3_04 		0.820 0.868
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMEP00000017564 Homeodomain 147 197
ENSAMEP00000017564 Homeodomain 204 226

Links

Other Homeodomain family TFs
Other Ailuropoda melanoleuca TFs

Invalid Input OrderBy

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action