IRX4 (Cavia porcellus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCPOG00000023150 T208197_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000015136 Homeodomain 45 103

Links

Other Homeodomain family TFs
Other Cavia porcellus TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M407DRAFT_127717 Tulasnella calospora M407DRAFT_127717 N
V565_042130 Rhizoctonia solani V565_042130 N
SCHCODRAFT_82290 Schizophyllum commune SCHCODRAFT_82290 N
PISMIDRAFT_677624 Pisolithus microcarpus PISMIDRAFT_677624 N
PILCRDRAFT_818762 Piloderma croceum PILCRDRAFT_818762 N
PILCRDRAFT_227592 Piloderma croceum PILCRDRAFT_227592 N
PAXRUDRAFT_15381 Paxillus rubicundulus PAXRUDRAFT_15381 N
PAXINDRAFT_169835 Paxillus involutus PAXINDRAFT_169835 N
Moror_14481 Moniliophthora roreri Moror_14481 N
M413DRAFT_180130 Hebeloma cylindrosporum M413DRAFT_180130 N
AGABI2DRAFT_201123 Agaricus bisporus AGABI2DRAFT_201123 N
M404DRAFT_118248 Pisolithus tinctorius M404DRAFT_118248 N
M378DRAFT_9274 Amanita muscaria M378DRAFT_9274 N
K443DRAFT_670931 Laccaria amethystina K443DRAFT_670931 N
GYMLUDRAFT_41790 Gymnopus luxurians GYMLUDRAFT_41790 N
GALMADRAFT_481013 Galerina marginata GALMADRAFT_481013 N
CY34DRAFT_802736 Suillus luteus CY34DRAFT_802736 N
CERSUDRAFT_118039 Ceriporiopsis subvermispora CERSUDRAFT_118039 N
BOTBODRAFT_50643 Botryobasidium botryosum BOTBODRAFT_50643 N
BOTBODRAFT_349070 Botryobasidium botryosum BOTBODRAFT_349070 N