ENSCSAVG00000001801 (Ciona savignyi)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSCSAVG00000001801 T208438_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pha-2
M02184_2.00 		Caenorhabditis elegans
NNNATNDNNN
NNNHNATNNN		 PBM
Weirauch et al.(2014)
pTH6423 		0.709 0.825
HHEX
M06541_2.00 		Drosophila melanogaster
WYBAATWA
TWATTVRW		 B1H
Mathelier et al.(2014)
MA0183.1 		0.683 0.667
HHEX
M06358_2.00 		Drosophila melanogaster
WYBAATWA
TWATTVRW		 B1H
Zhu et al.(2011)
CG7056_Cell_FBgn0038852 		0.683 0.667
HHEX
M06359_2.00 		Drosophila melanogaster
NYBAATWR
YWATTVRN		 B1H
Zhu et al.(2011)
CG7056_SOLEXA_FBgn0038852 		0.683 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAVP00000003040 Homeodomain 259 315

Links

Other Homeodomain family TFs
Other Ciona savignyi TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf026007m Mimulus guttatus mgf026007m I
TRAES3BF110700030CFD_g Triticum aestivum TRAES3BF110700030CFD_g I
Traes_3DS_DF23FE973 Triticum aestivum Traes_3DS_DF23FE973 I
TRIUR3_09932 Triticum urartu TRIUR3_09932 I
TRIUR3_18966 Triticum urartu TRIUR3_18966 I
VIT_04s0008g00900 Vitis vinifera VIT_04s0008g00900 I
VIT_09s0002g03540 Vitis vinifera VIT_09s0002g03540 I
VIT_09s0002g03610 Vitis vinifera VIT_09s0002g03610 I
cassava4263.m1 Manihot esculenta cassava4263.m1 I
Cucsa.285620 Cucumis sativus Cucsa.285620 I
Cucsa.397260 Cucumis sativus Cucsa.397260 I
mgf017789m Mimulus guttatus mgf017789m I
Bra003969 Brassica rapa Bra003969 I
Aquca_025_00167 Aquilegia coerulea Aquca_025_00167 I
Ciclev10009011m.g Citrus clementina Ciclev10009011m.g I
Gorai.008G147400 Gossypium raimondii Gorai.008G147400 I
Lus10010733.g Linum usitatissimum Lus10010733.g I
MDP0000136727 Malus domestica MDP0000136727 I
orange1.1g038601m.g Citrus sinensis orange1.1g038601m.g I
Pavir.Eb00103 Panicum virgatum Pavir.Eb00103 I
Pavir.J01328 Panicum virgatum Pavir.J01328 I
Pavir.J35324 Panicum virgatum Pavir.J35324 I
Pavir.J38363 Panicum virgatum Pavir.J38363 I
Traes_3AL_891566958 Triticum aestivum Traes_3AL_891566958 I
Bo6g094990 Brassica oleracea Bo6g094990 I
F775_08891 Aegilops tauschii F775_08891 I
F775_18928 Aegilops tauschii F775_18928 I
GRMZM2G176568 Zea mays GRMZM2G176568 I
GSMUA_Achr9G05930_001 Musa acuminata GSMUA_Achr9G05930_001 I
MLOC_52982 Hordeum vulgare MLOC_52982 I
MTR_1g033620 Medicago truncatula MTR_1g033620 I
OB05G25980 Oryza brachyantha OB05G25980 I
OBART04G08050 Oryza barthii OBART04G08050 I
OBART05G18640 Oryza barthii OBART05G18640 I
PGSC0003DMG400020344 Solanum tuberosum PGSC0003DMG400020344 I
Sb03g003150 Sorghum bicolor Sb03g003150 I
Sb09g006060 Sorghum bicolor Sb09g006060 I
Sb09g030390 Sorghum bicolor Sb09g030390 I
Si022624m.g Setaria italica Si022624m.g I
Solyc02g082380.1 Solanum lycopersicum Solyc02g082380.1 I
Traes_1AL_01E24503F Triticum aestivum Traes_1AL_01E24503F I
Traes_1BL_1B12D7856 Triticum aestivum Traes_1BL_1B12D7856 I
Traes_3AS_794DAF12D Triticum aestivum Traes_3AS_794DAF12D I
GLYMA07G08081 Glycine max GLYMA07G08081 N
Traes_1AL_1360F98E7 Triticum aestivum Traes_1AL_1360F98E7 N
PDK_20s1665441g001 Phoenix dactylifera PDK_20s1665441g001 N