lmx1a (Danio rerio)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSDARG00000020354 T208557_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Lmx1a
M00432_2.00 		Mus musculus
NNDATKRN
NYMATHNN		 PBM
Berger et al.(2008)
Lmx1a_2238 		0.867 1.000
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.669 0.258
Lmx1b
M00482_2.00 		Mus musculus
NDADDRN
NYHHTHN		 PBM
Berger et al.(2008)
Lmx1b_3433 		0.867 1.000
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.669 0.258
LMX1A
M03179_2.00 		Homo sapiens
NTAATTAV
BTAATTAN		 SELEX
Jolma et al.(2013)
LMX1A_1 		0.867 1.000
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.669 0.258
LMX1B
M03153_2.00 		Homo sapiens
NTWATTRN
NYAATWAN		 SELEX
Jolma et al.(2013)
LMX1B_1 		0.867 1.000
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.620 0.290
LMX1B
M03154_2.00 		Homo sapiens
DTAATTRV
BYAATTAH		 SELEX
Jolma et al.(2013)
LMX1B_2 		0.867 1.000
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.620 0.290
LMX1A
M05215_2.00 		Homo sapiens
YTAATTAV
BTAATTAR		 SELEX
Yin et al.(2017)
LMX1A_eDBD_HT-SELEX 		0.867 1.000
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.620 0.290
LMX1B
M05153_2.00 		Homo sapiens
NNNBTAATTAN
NTAATTAVNNN		 SELEX
Yin et al.(2017)
LMX1B_eDBD_HT-SELEX 		0.867 1.000
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.620 0.290
LMX1B
M05156_2.00 		Homo sapiens
NDDTTAATTAH
DTAATTAAHHN		 SELEX
Yin et al.(2017)
LMX1B_FL_HT-SELEX 		0.867 1.000
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.620 0.290
LMX1A
M05216_2.00 		Homo sapiens
DTAAYGHN
NDCRTTAH		 SELEX
Yin et al.(2017)
LMX1A_eDBD_Methyl-HT-SELEX_1 		0.867 1.000
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.620 0.290
LMX1A
M05217_2.00 		Homo sapiens
YTAATTRN
NYAATTAR		 SELEX
Yin et al.(2017)
LMX1A_eDBD_Methyl-HT-SELEX_2 		0.867 1.000
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.620 0.290
LMX1B
M05154_2.00 		Homo sapiens
NNNBYAATTRN
NYAATTRVNNN		 SELEX
Yin et al.(2017)
LMX1B_eDBD_Methyl-HT-SELEX_1 		0.867 1.000
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.620 0.290
LMX1B
M05155_2.00 		Homo sapiens
WTAAYGAR
YTCRTTAW		 SELEX
Yin et al.(2017)
LMX1B_eDBD_Methyl-HT-SELEX_2 		0.867 1.000
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.620 0.290
LMX1B
M05157_2.00 		Homo sapiens
TTAACGAG
CTCGTTAA		 SELEX
Yin et al.(2017)
LMX1B_FL_Methyl-HT-SELEX_1 		0.867 1.000
LMX1B
M05158_2.00 		Homo sapiens
NWWTTAATTAW
WTAATTAAWWN		 SELEX
Yin et al.(2017)
LMX1B_FL_Methyl-HT-SELEX_2 		0.867 1.000
CG32105
M03873_2.00 		Drosophila melanogaster
KTAATTAR
YTAATTAM		 SELEX
Nitta et al.(2015)
CG32105_1 		0.839 0.842
CG32105
M06546_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Mathelier et al.(2014)
MA0178.1 		0.839 0.842
CG32105
M06368_2.00 		Drosophila melanogaster
WYTAATTAV
BTAATTARW		 B1H
Zhu et al.(2011)
CG32105_Cell_FBgn0052105 		0.839 0.842
CG32105
M06369_2.00 		Drosophila melanogaster
NNTWATTR
YAATWANN		 B1H
Zhu et al.(2011)
CG32105_SOLEXA_FBgn0052105 		0.839 0.842
SNAPOd2T00003340001
M02228_2.00 		Oikopleura dioica
NNNTAATWWN
NWWATTANNN		 PBM
Weirauch et al.(2014)
pTH6369 		0.819 0.754
CG4328
M06538_2.00 		Drosophila melanogaster
WTWATTR
YAATWAW		 B1H
Mathelier et al.(2014)
MA0182.1 		0.813 0.860
CG4328
M06352_2.00 		Drosophila melanogaster
NWWWATTR
YAATWWWN		 B1H
Zhu et al.(2011)
CG4328_Cell_FBgn0036274 		0.813 0.860
CG4328
M06353_2.00 		Drosophila melanogaster
YAATWANN
NNTWATTR		 B1H
Zhu et al.(2011)
CG4328_SOLEXA_FBgn0036274 		0.813 0.860
Lhx4
M00430_2.00 		Mus musculus
NYAATHN
NDATTRN		 PBM
Berger et al.(2008)
Lhx4_1719 		0.715 0.579
Lhx3
M00435_2.00 		Mus musculus
NNNYAATHW
WDATTRNNN		 PBM
Berger et al.(2008)
Lhx3_3431 		0.715 0.579
Lhx4
M03257_2.00 		Mus musculus
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
Lhx4_1 		0.715 0.579
LHX4
M05063_2.00 		Homo sapiens
BYAATYRV
BYRATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_HT-SELEX 		0.715 0.579
LHX4
M05066_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
LHX4_FL_HT-SELEX 		0.715 0.579
Lhx3
M02687_2.00 		Mus musculus
VRWTAATTAATTW
WAATTAATTAWYB		 SELEX
Mathelier et al.(2014)
MA0135.1 		0.715 0.579
LHX3
M09137_2.00 		Homo sapiens
NYTAATTAAWTHH
DDAWTTAATTARN		 Misc
Kulakovskiy et al.(2013)
LHX3_HUMAN.H11MO.0.C 		0.715 0.579
Lhx3
M09188_2.00 		Mus musculus
NYTRATKRV
BYMATYARN		 Misc
Kulakovskiy et al.(2013)
LHX3_MOUSE.H11MO.0.C 		0.715 0.579
Lhx3
M09570_2.00 		Mus musculus
NNBTAATTAV
BTAATTAVNN		 Misc
Heinz et al.(2010)
Neuron-Lhx3_GSE31456 		0.715 0.579
LHX3
M10657_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3A_01 		0.715 0.579
LHX3
M10658_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3b_01 		0.715 0.579
LHX3
M10659_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3_Q3 		0.715 0.579
LHX4
M05064_2.00 		Homo sapiens
BYAATTRV
BYAATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_1 		0.715 0.579
LHX4
M05065_2.00 		Homo sapiens
NTWAYGHN
NDCRTWAN		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_2 		0.715 0.579
LHX4
M05067_2.00 		Homo sapiens
NYAATTRN
NYAATTRN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_1 		0.715 0.579
LHX4
M05068_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_2 		0.715 0.579
zfh-2
M01850_2.00 		Caenorhabditis elegans
NYTAATTARNN
NNYTAATTARN		 PBM
Weirauch et al.(2014)
pTH6132 		0.707 0.491
zfhx4
M02108_2.00 		Tetraodon nigroviridis
NNTAATTRN
NYAATTANN		 PBM
Weirauch et al.(2014)
pTH5654 		0.707 0.491
Otp
M00417_2.00 		Mus musculus
NNHAATND
HNATTDNN		 PBM
Berger et al.(2008)
Otp_3496 		0.704 0.474
Lim3
M02116_2.00 		Drosophila melanogaster
NNNNNATBRN
NYVATNNNNN		 PBM
Weirauch et al.(2014)
pTH6478 		0.703 0.561
Lim3
M03796_2.00 		Drosophila melanogaster
BTAATTAV
BTAATTAV		 SELEX
Nitta et al.(2015)
Lim3_1 		0.703 0.561
Lim3
M06492_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Mathelier et al.(2014)
MA0195.1 		0.703 0.561
Lim3
M06258_2.00 		Drosophila melanogaster
HHTAATKA
TMATTADD		 B1H
Zhu et al.(2011)
Lim3_Cell_FBgn0002023 		0.703 0.561
Lim3
M06259_2.00 		Drosophila melanogaster
HTRATTR
YAATYAD		 B1H
Zhu et al.(2011)
Lim3_SOLEXA_FBgn0002023 		0.703 0.561
otp
M03834_2.00 		Drosophila melanogaster
BTAATTRN
NYAATTAV		 SELEX
Nitta et al.(2015)
otp_1 		0.700 0.439
otp
M03835_2.00 		Drosophila melanogaster
YTAATTRV
BYAATTAR		 SELEX
Nitta et al.(2015)
otp_2 		0.700 0.439
otp
M06516_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Mathelier et al.(2014)
MA0236.1 		0.700 0.439
otp
M06309_2.00 		Drosophila melanogaster
HYTAATTA
TAATTARD		 B1H
Zhu et al.(2011)
Otp_Cell_FBgn0015524 		0.700 0.439
otp
M06310_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Otp_SOLEXA_FBgn0015524 		0.700 0.439
C4B866_NEMVE
M02052_2.00 		Nematostella vectensis
NNTTAATTARNN
NNYTAATTAANN		 PBM
Weirauch et al.(2014)
pTH6176 		0.693 0.491
VSX2
M00287_2.00 		Homo sapiens
NYTAATTARN
NYTAATTARN		 PBM
Barrera et al.(2016)
VSX2_REF 		0.690 0.421
VSX2
M03124_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX2_1 		0.690 0.421
VSX2
M05036_2.00 		Homo sapiens
CTAATTAN
NTAATTAG		 SELEX
Yin et al.(2017)
VSX2_eDBD_HT-SELEX 		0.690 0.421
VSX2
M05039_2.00 		Homo sapiens
GCYAATYWY
RWRATTRGC		 SELEX
Yin et al.(2017)
VSX2_FL_HT-SELEX 		0.690 0.421
Vsx2
M09180_2.00 		Mus musculus
NNRGCTAATTAR
YTAATTAGCYNN		 Misc
Kulakovskiy et al.(2013)
VSX2_MOUSE.H11MO.0.C 		0.690 0.421
VSX2
M10676_2.00 		Homo sapiens
HNNGCTAATTANBN
NVNTAATTAGCNND		 Transfac
Matys et al.(2006)
V$CHX10_01 		0.690 0.421
VSX2
M05037_2.00 		Homo sapiens
VYAATTRR
YYAATTRB		 SELEX
Yin et al.(2017)
VSX2_eDBD_Methyl-HT-SELEX_1 		0.690 0.421
VSX2
M05038_2.00 		Homo sapiens
NTAAYKHN
NDMRTTAN		 SELEX
Yin et al.(2017)
VSX2_eDBD_Methyl-HT-SELEX_2 		0.690 0.421
VSX2
M05040_2.00 		Homo sapiens
NTAAYKVN
NBMRTTAN		 SELEX
Yin et al.(2017)
VSX2_FL_Methyl-HT-SELEX_1 		0.690 0.421
VSX2
M05041_2.00 		Homo sapiens
GCYAATYWY
RWRATTRGC		 SELEX
Yin et al.(2017)
VSX2_FL_Methyl-HT-SELEX_2 		0.690 0.421
VSX2
M00285_2.00 		Homo sapiens
NDTWTATTHNNN
NNNDAATAWAHN		 PBM
Barrera et al.(2016)
VSX2_R200P 		0.690 0.404
VSX2
M00286_2.00 		Homo sapiens
YRWKWNN
NNWMWYR		 PBM
Barrera et al.(2016)
VSX2_R200Q 		0.690 0.404
LHX2
M02085_2.00 		Homo sapiens
NNNYAAHDDN
NHHDTTRNNN		 PBM
Weirauch et al.(2014)
pTH5812 		0.682 0.456
Lhx2
M00380_2.00 		Mus musculus
NTAATKRN
NYMATTAN		 PBM
Berger et al.(2008)
Lhx2_0953 		0.682 0.456
Lhx9
M00406_2.00 		Mus musculus
NTAATDRN
NYHATTAN		 PBM
Berger et al.(2008)
Lhx9_3492 		0.682 0.456
LHX2
M03106_2.00 		Homo sapiens
NNTAATTAGN
NCTAATTANN		 SELEX
Jolma et al.(2013)
LHX2_1 		0.682 0.456
LHX2
M03107_2.00 		Homo sapiens
YAATTANVCTAATTR
YAATTAGBNTAATTR		 SELEX
Jolma et al.(2013)
LHX2_2 		0.682 0.456
LHX9
M03163_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
LHX9_1 		0.682 0.456
LHX9
M03164_2.00 		Homo sapiens
TAATTRGYMATTA
TAATKRCYAATTA		 SELEX
Jolma et al.(2013)
LHX9_2 		0.682 0.456
LHX9
M05170_2.00 		Homo sapiens
YTAATTRG
CYAATTAR		 SELEX
Yin et al.(2017)
LHX9_eDBD_HT-SELEX 		0.682 0.456
LHX9
M05173_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
LHX9_FL_HT-SELEX 		0.682 0.456
LHX2
M09136_2.00 		Homo sapiens
NBYTAATTRVNB
VNBYAATTARVN		 Misc
Kulakovskiy et al.(2013)
LHX2_HUMAN.H11MO.0.A 		0.682 0.456
Lhx2
M09169_2.00 		Mus musculus
NNTAATKRGN
NCYMATTANN		 Misc
Kulakovskiy et al.(2013)
LHX2_MOUSE.H11MO.0.A 		0.682 0.456
Lhx2
M09562_2.00 		Mus musculus
NYTAATTA
TAATTARN		 Misc
Heinz et al.(2010)
HFSC-Lhx2_GSE48068 		0.682 0.456
LHX2
M10655_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX2_Q4 		0.682 0.456
LHX2
M10656_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX2_Q6 		0.682 0.456
LHX9
M05171_2.00 		Homo sapiens
YTAATTRS
SYAATTAR		 SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_1 		0.682 0.456
LHX9
M05172_2.00 		Homo sapiens
HTAACGAB
VTCGTTAD		 SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_2 		0.682 0.456
LHX9
M05174_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_1 		0.682 0.456
LHX9
M05175_2.00 		Homo sapiens
HTAACGAB
VTCGTTAD		 SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_2 		0.682 0.456
Alx3
M00402_2.00 		Mus musculus
WAATNDN
NHNATTW		 PBM
Berger et al.(2008)
Alx3_3418 		0.681 0.421
ALX3
M03172_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ALX3_1 		0.681 0.421
ALX3
M03173_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ALX3_2 		0.681 0.421
ALX3
M03174_2.00 		Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
ALX3_3 		0.681 0.421
ALX3
M05195_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ALX3_eDBD_HT-SELEX 		0.681 0.421
ALX3
M05198_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX3_FL_HT-SELEX 		0.681 0.421
ALX3
M05196_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_1 		0.681 0.421
ALX3
M05197_2.00 		Homo sapiens
NTAAYBHN
NDVRTTAN		 SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_2 		0.681 0.421
ALX3
M05199_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_1 		0.681 0.421
ALX3
M05200_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_2 		0.681 0.421
ap
M06478_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0209.1 		0.680 0.439
ap
M06214_2.00 		Drosophila melanogaster
VYTAATKA
TMATTARB		 B1H
Zhu et al.(2011)
Ap_Cell_FBgn0000099 		0.680 0.439
ap
M06215_2.00 		Drosophila melanogaster
BAATHA
TDATTV		 B1H
Zhu et al.(2011)
ap_FlyReg_FBgn0000099 		0.680 0.439
ap
M06216_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Zhu et al.(2011)
Ap_SOLEXA_FBgn0000099 		0.680 0.439
ap
M10781_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$AP_Q6 		0.680 0.439
PROP1
M00317_2.00 		Homo sapiens
HAAYNNNNNN
NNNNNNRTTD		 PBM
Barrera et al.(2016)
PROP1_REF 		0.679 0.421
Prop1
M00498_2.00 		Mus musculus
NRAKDDN
NHHMTYN		 PBM
Berger et al.(2008)
Prop1_3949 		0.679 0.421
PROP1
M03216_2.00 		Homo sapiens
TAATTHRATTA
TAATYDAATTA		 SELEX
Jolma et al.(2013)
PROP1_1 		0.679 0.421
PROP1
M03217_2.00 		Homo sapiens
TAATKNRRTTA
TAAYYNMATTA		 SELEX
Jolma et al.(2013)
PROP1_2 		0.679 0.421
PROP1
M05298_2.00 		Homo sapiens
WAATTNNRTTD
HAAYNNAATTW		 SELEX
Yin et al.(2017)
PROP1_eDBD_HT-SELEX 		0.679 0.421
PROP1
M05301_2.00 		Homo sapiens
TAATTNVATTA
TAATBNAATTA		 SELEX
Yin et al.(2017)
PROP1_FL_HT-SELEX 		0.679 0.421
Prop1
M09210_2.00 		Mus musculus
TAATKRRATTA
TAATYYMATTA		 Misc
Kulakovskiy et al.(2013)
PROP1_MOUSE.H11MO.0.C 		0.679 0.421
PROP1
M10777_2.00 		Sus scrofa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PROP1_01 		0.679 0.421
PROP1
M10737_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PROP1_Q2 		0.679 0.421
PROP1
M00315_2.00 		Homo sapiens
NNHNATNN
NNATNDNN		 PBM
Barrera et al.(2016)
PROP1_R112Q 		0.679 0.421
PROP1
M05299_2.00 		Homo sapiens
TAATTNVRTTW
WAAYBNAATTA		 SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_1 		0.679 0.421
PROP1
M05300_2.00 		Homo sapiens
TAAYNDCRTTA
TAAYGHNRTTA		 SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_2 		0.679 0.421
PROP1
M05302_2.00 		Homo sapiens
TAATTNVRTTA
TAAYBNAATTA		 SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_1 		0.679 0.421
PROP1
M05303_2.00 		Homo sapiens
TAATYRVRTTA
TAAYBYRATTA		 SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_2 		0.679 0.421
vsx2
M02079_2.00 		Danio rerio
NNYTAATTARN
NYTAATTARNN		 PBM
Weirauch et al.(2014)
pTH6221 		0.678 0.404
Alx1
M00471_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 PBM
Berger et al.(2008)
Cart1_0997 		0.677 0.439
Alx1
M00472_2.00 		Mus musculus
NTAATDDN
NHHATTAN		 PBM
Berger et al.(2008)
Cart1_1275 		0.677 0.439
ALX1
M03226_2.00 		Homo sapiens
NTAATTRVRTTAN
NTAAYBYAATTAN		 SELEX
Jolma et al.(2013)
CART1_1 		0.677 0.439
Alx1
M03272_2.00 		Mus musculus
NNTAATTRRD
HYYAATTANN		 SELEX
Jolma et al.(2013)
Alx1_1 		0.677 0.439
Alx1
M03273_2.00 		Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
Alx1_2 		0.677 0.439
CG32532
M03874_2.00 		Drosophila melanogaster
NTAAYBNVRTTAN
NTAAYBNVRTTAN		 SELEX
Nitta et al.(2015)
CG32532_1 		0.677 0.439
ALX1
M05327_2.00 		Homo sapiens
TAATYTAATTA
TAATTARATTA		 SELEX
Yin et al.(2017)
ALX1_FL_HT-SELEX 		0.677 0.439
CG32532
M06547_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0179.1 		0.677 0.439
CG32532
M06370_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
CG32532_Cell_FBgn0052532 		0.677 0.439
CG32532
M06371_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG32532_SOLEXA_FBgn0052532 		0.677 0.439
ALX1
M09160_2.00 		Homo sapiens
VTAATYRVATTA
TAATBYRATTAB		 Misc
Kulakovskiy et al.(2013)
ALX1_HUMAN.H11MO.0.B 		0.677 0.439
Alx1
M09201_2.00 		Mus musculus
VTAATYRVATTA
TAATBYRATTAB		 Misc
Kulakovskiy et al.(2013)
ALX1_MOUSE.H11MO.0.B 		0.677 0.439
ALX1
M10741_2.00 		Homo sapiens
VVHTAATKNNHATTABYN
NRVTAATDNNMATTADBB		 Transfac
Matys et al.(2006)
V$CART1_01 		0.677 0.439
ALX1
M05328_2.00 		Homo sapiens
TAATYTAATTA
TAATTARATTA		 SELEX
Yin et al.(2017)
ALX1_FL_Methyl-HT-SELEX 		0.677 0.439
Vsx1
M00459_2.00 		Mus musculus
NNTAATDDN
NHHATTANN		 PBM
Berger et al.(2008)
Vsx1_1728 		0.677 0.421
Alx4
M00487_2.00 		Mus musculus
NTAATDDN
NHHATTAN		 PBM
Berger et al.(2008)
Alx4_1744 		0.677 0.421
ALX4
M03079_2.00 		Homo sapiens
NTAATYNRRTTAN
NTAAYYNRATTAN		 SELEX
Jolma et al.(2013)
ALX4_1 		0.677 0.421
Alx4
M03278_2.00 		Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
Alx4_1 		0.677 0.421
Vsx1
M03267_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Vsx1_1 		0.677 0.421
ALX4
M04917_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX4_eDBD_HT-SELEX 		0.677 0.421
ALX4
M10637_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ALX4_01 		0.677 0.421
ALX4
M04918_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_1 		0.677 0.421
ALX4
M04919_2.00 		Homo sapiens
NTWAYGHN
NDCRTWAN		 SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_2 		0.677 0.421
VSX1
M00269_2.00 		Homo sapiens
NNWAAYNNN
NNNRTTWNN		 PBM
Barrera et al.(2016)
VSX1_REF 		0.677 0.404
VSX1
M00266_2.00 		Homo sapiens
NNTAAYNNN
NNNRTTANN		 PBM
Barrera et al.(2016)
VSX1_G160D 		0.677 0.404
Sebox
M02097_2.00 		Mus musculus
NHTTAATTAN
NTAATTAADN		 PBM
Weirauch et al.(2014)
pTH6379 		0.677 0.386
hbn
M03813_2.00 		Drosophila melanogaster
HTAATYTAATTAD
HTAATTARATTAD		 SELEX
Nitta et al.(2015)
hbn_1 		0.676 0.456
hbn
M06506_2.00 		Drosophila melanogaster
TTAATTR
YAATTAA		 B1H
Mathelier et al.(2014)
MA0226.1 		0.676 0.456
hbn
M06291_2.00 		Drosophila melanogaster
TWAWTTR
YAAWTWA		 B1H
Zhu et al.(2011)
Hbn_Cell_FBgn0008636 		0.676 0.456
hbn
M06292_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
Hbn_SOLEXA_FBgn0008636 		0.676 0.456
Pph13
M03845_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Pph13_1 		0.675 0.404
Pph13
M06522_2.00 		Drosophila melanogaster
NTAATTR
YAATTAN		 B1H
Mathelier et al.(2014)
MA0200.1 		0.675 0.404
Pph13
M06321_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
Pph13_Cell_FBgn0023489 		0.675 0.404
Pph13
M06322_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Pph13_SOLEXA_FBgn0023489 		0.675 0.404
al
M03776_2.00 		Drosophila melanogaster
TAAYBNVRTTA
TAAYBNVRTTA		 SELEX
Nitta et al.(2015)
al_1 		0.673 0.404
al
M06477_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Mathelier et al.(2014)
MA0208.1 		0.673 0.404
al
M06212_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Zhu et al.(2011)
Al_Cell_FBgn0000061 		0.673 0.404
al
M06213_2.00 		Drosophila melanogaster
NNYTAATTR
YAATTARNN		 B1H
Zhu et al.(2011)
Al_SOLEXA_FBgn0000061 		0.673 0.404
SNAPOd2T00006620001
M02231_2.00 		Oikopleura dioica
NTAATTRN
NYAATTAN		 PBM
Weirauch et al.(2014)
pTH5666 		0.672 0.456
CG5369
M03876_2.00 		Drosophila melanogaster
TAATTHVATTA
TAATBDAATTA		 SELEX
Nitta et al.(2015)
CG5369_1 		0.672 0.439
CG5369
M03877_2.00 		Drosophila melanogaster
TAATTRNNTAATBN
NVATTANNYAATTA		 SELEX
Nitta et al.(2015)
CG5369_2 		0.672 0.439
CG5369
M03878_2.00 		Drosophila melanogaster
TAATTVRATWA
TWATYBAATTA		 SELEX
Nitta et al.(2015)
CG5369_3 		0.672 0.439
inv
M06491_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Mathelier et al.(2014)
MA0229.1 		0.672 0.404
inv
M06255_2.00 		Drosophila melanogaster
DYTAATTR
YAATTARH		 B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269 		0.672 0.404
inv
M06256_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269 		0.672 0.404
inv
M06257_2.00 		Drosophila melanogaster
NHTAATTRV
BYAATTADN		 B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269 		0.672 0.404
en
M03793_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
en_1 		0.672 0.386
en
M06485_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0220.1 		0.672 0.386
en
M06236_2.00 		Drosophila melanogaster
NYTAATTR
YAATTARN		 B1H
Zhu et al.(2011)
En_Cell_FBgn0000577 		0.672 0.386
en
M06237_2.00 		Drosophila melanogaster
DBTAATKR
YMATTAVH		 B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577 		0.672 0.386
en
M06238_2.00 		Drosophila melanogaster
NNNTAATTRN
NYAATTANNN		 B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577 		0.672 0.386
en
M06239_2.00 		Drosophila melanogaster
NTAATTR
YAATTAN		 B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577 		0.672 0.386
en
M09677_2.00 		Drosophila melanogaster
HTAATTRN
NYAATTAD		 Misc
Kulakovskiy et al.(2009)
en 		0.672 0.386
en
M10785_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$EN_Q6 		0.672 0.386
SHOX
M02095_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 PBM
Weirauch et al.(2014)
pTH5805 		0.671 0.421
Shox2
M00439_2.00 		Mus musculus
NTAATDDN
NHHATTAN		 PBM
Berger et al.(2008)
Shox2_2641 		0.671 0.421
SHOX
M03232_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
SHOX_1 		0.671 0.421
SHOX2
M03204_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
SHOX2_1 		0.671 0.421
Shox2
M03263_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Shox2_1 		0.671 0.421
SHOX
M05366_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
SHOX_eDBD_HT-SELEX 		0.671 0.421
Shox2
M10772_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SHOX2_05 		0.671 0.421
SHOX
M05367_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_1 		0.671 0.421
SHOX
M05368_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_2 		0.671 0.421
En1
M00519_2.00 		Mus musculus
HNWTNNN
NNNAWND		 PBM
Berger et al.(2008)
En1_3123 		0.671 0.439
EN1
M03180_2.00 		Homo sapiens
NNTAATTRVB
VBYAATTANN		 SELEX
Jolma et al.(2013)
EN1_1 		0.671 0.439
EN1
M03181_2.00 		Homo sapiens
TAATTRSNYAATTA
TAATTRNSYAATTA		 SELEX
Jolma et al.(2013)
EN1_2 		0.671 0.439
EN1
M03182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
EN1_3 		0.671 0.439
EN1
M03183_2.00 		Homo sapiens
TDAKKRSNYMATTA
TAATKRNSYMMTHA		 SELEX
Jolma et al.(2013)
EN1_4 		0.671 0.439
EN1
M05218_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX 		0.671 0.439
EN1
M05871_2.00 		Homo sapiens
VNYAATTA
TAATTRNB		 SMiLE-seq
Isakova et al.(2017)
EN1 		0.671 0.439
EN1
M10714_2.00 		Homo sapiens
RTDDTBB
VVAHHAY		 Transfac
Matys et al.(2006)
V$EN1_01 		0.671 0.439
EN1
M05219_2.00 		Homo sapiens
NTAAYGAB
VTCRTTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1 		0.671 0.439
EN1
M05220_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2 		0.671 0.439
En2
M00484_2.00 		Mus musculus
NNYHATHN
NDATDRNN		 PBM
Berger et al.(2008)
En2_0952 		0.671 0.421
EN2
M03189_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
EN2_1 		0.671 0.421
EN2
M03190_2.00 		Homo sapiens
VBTAATTRNN
NNYAATTAVB		 SELEX
Jolma et al.(2013)
EN2_2 		0.671 0.421
En2
M03276_2.00 		Mus musculus
VBTAATTASN
NSTAATTAVB		 SELEX
Jolma et al.(2013)
En2_1 		0.671 0.421
EN2
M05237_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX 		0.671 0.421
EN2
M05238_2.00 		Homo sapiens
VHTDAYGHB
VDCRTHADB		 SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1 		0.671 0.421
EN2
M05239_2.00 		Homo sapiens
BTAATTRV
BYAATTAV		 SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2 		0.671 0.421
PROP1
M00316_2.00 		Homo sapiens
DTAATTRK
MYAATTAH		 PBM
Barrera et al.(2016)
PROP1_R99Q 		0.671 0.404
DRGX
M03199_2.00 		Homo sapiens
NTAATTNRATTAN
NTAATYNAATTAN		 SELEX
Jolma et al.(2013)
DRGX_1 		0.671 0.456
DRGX
M05253_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
DRGX_eDBD_HT-SELEX 		0.671 0.456
Drgx
M10774_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRRXL1_01 		0.671 0.456
DRGX
M05254_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
DRGX_eDBD_Methyl-HT-SELEX 		0.671 0.456
Uncx
M00443_2.00 		Mus musculus
NTAATNDN
NHNATTAN		 PBM
Berger et al.(2008)
Uncx4 		0.671 0.421
uncx
M02111_2.00 		Tetraodon nigroviridis
NNTAATTRN
NYAATTANN		 PBM
Weirauch et al.(2014)
pTH5474 		0.671 0.421
UNCX
M03191_2.00 		Homo sapiens
NWAATTVVRTHWN
NWDAYBBAATTWN		 SELEX
Jolma et al.(2013)
UNCX_1 		0.671 0.421
UNCX
M03192_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
UNCX_2 		0.671 0.421
Uncx
M03264_2.00 		Mus musculus
NTAATTVRATTAN
NTAATYBAATTAN		 SELEX
Jolma et al.(2013)
Uncx_1 		0.671 0.421
Uncx
M03265_2.00 		Mus musculus
NTAATTRR
YYAATTAN		 SELEX
Jolma et al.(2013)
Uncx_2 		0.671 0.421
CG2808
M03875_2.00 		Drosophila melanogaster
TAATYNSRTTA
TAAYSNRATTA		 SELEX
Nitta et al.(2015)
CG2808_1 		0.671 0.421
UNCX
M05240_2.00 		Homo sapiens
NYAATTRV
BYAATTRN		 SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX 		0.671 0.421
UNCX
M05241_2.00 		Homo sapiens
NYRRYKNN
NNMRYYRN		 SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX 		0.671 0.421
ARX
M00264_2.00 		Homo sapiens
NNWRATNNN
NNNATYWNN		 PBM
Barrera et al.(2016)
ARX_REF 		0.671 0.404
PHOX2B
M00282_2.00 		Homo sapiens
TAATTRRY
RYYAATTA		 PBM
Barrera et al.(2016)
PHOX2B_REF 		0.671 0.404
Phox2a
M00400_2.00 		Mus musculus
NNHAAYNN
NNRTTDNN		 PBM
Berger et al.(2008)
Phox2a_3947 		0.671 0.404
Phox2b
M00401_2.00 		Mus musculus
NNHAAYNN
NNRTTDNN		 PBM
Berger et al.(2008)
Phox2b_3948 		0.671 0.404
Arx
M00467_2.00 		Mus musculus
NTAATTDN
NHAATTAN		 PBM
Berger et al.(2008)
Arx_1738 		0.671 0.404
ARX
M03076_2.00 		Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
ARX_1 		0.671 0.404
PHOX2A
M03194_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2A_1 		0.671 0.404
PHOX2B
M03113_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2B_1 		0.671 0.404
PHOX2B
M03114_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2B_2 		0.671 0.404
Arx
M03269_2.00 		Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
Arx_1 		0.671 0.404
ARX
M04895_2.00 		Homo sapiens
BTAATTRR
YYAATTAV		 SELEX
Yin et al.(2017)
ARX_eDBD_HT-SELEX 		0.671 0.404
PHOX2A
M05244_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PHOX2A_eDBD_HT-SELEX 		0.671 0.404
PHOX2B
M05008_2.00 		Homo sapiens
BTAATYRV
BYRATTAV		 SELEX
Yin et al.(2017)
PHOX2B_eDBD_HT-SELEX 		0.671 0.404
PHOX2B
M05010_2.00 		Homo sapiens
TAATTWRATTA
TAATYWAATTA		 SELEX
Yin et al.(2017)
PHOX2B_FL_HT-SELEX 		0.671 0.404
Phox2a
M09564_2.00 		Mus musculus
NTAATBNRATTA
TAATYNVATTAN		 Misc
Heinz et al.(2010)
Neuron-Phox2a_GSE31456 		0.671 0.404
Arx
M10775_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARX_05 		0.671 0.404
ARX
M00260_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
ARX_L343Q 		0.671 0.404
PHOX2B
M00280_2.00 		Homo sapiens
NNNHATAAWTDNN
NNHAWTTATDNNN		 PBM
Barrera et al.(2016)
PHOX2B_R141G 		0.671 0.404
PHOX2B
M00281_2.00 		Homo sapiens
NNNNNNNNRY
RYNNNNNNNN		 PBM
Barrera et al.(2016)
PHOX2B_R141Q 		0.671 0.404
ARX
M04896_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ARX_eDBD_Methyl-HT-SELEX 		0.671 0.404
PHOX2A
M05245_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PHOX2A_eDBD_Methyl-HT-SELEX 		0.671 0.404
PHOX2B
M05009_2.00 		Homo sapiens
BTAATYRN
NYRATTAV		 SELEX
Yin et al.(2017)
PHOX2B_eDBD_Methyl-HT-SELEX 		0.671 0.404
PHOX2B
M05011_2.00 		Homo sapiens
TAATTHRATTA
TAATYDAATTA		 SELEX
Yin et al.(2017)
PHOX2B_FL_Methyl-HT-SELEX 		0.671 0.404
repo
M03826_2.00 		Drosophila melanogaster
VTTAATTARB
VYTAATTAAB		 SELEX
Nitta et al.(2015)
repo_1 		0.671 0.439
repo
M03827_2.00 		Drosophila melanogaster
VKYAATTRRN
NYYAATTRMB		 SELEX
Nitta et al.(2015)
repo_2 		0.671 0.439
repo
M03828_2.00 		Drosophila melanogaster
VBYAATTRVNNBYAATTRVB
VBYAATTRVNNBYAATTRVB		 SELEX
Nitta et al.(2015)
repo_3 		0.671 0.439
repo
M06511_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Mathelier et al.(2014)
MA0240.1 		0.671 0.439
repo
M06301_2.00 		Drosophila melanogaster
DTTAATTA
TAATTAAH		 B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701 		0.671 0.439
repo
M06302_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701 		0.671 0.439
ARX
M00261_2.00 		Homo sapiens
NNWRAYNNN
NNNRTYWNN		 PBM
Barrera et al.(2016)
ARX_P353L 		0.671 0.386
ARX
M00262_2.00 		Homo sapiens
ATAATTAT
ATAATTAT		 PBM
Barrera et al.(2016)
ARX_P353R 		0.671 0.386
ISX
M00319_2.00 		Homo sapiens
DTAATTRK
MYAATTAH		 PBM
Barrera et al.(2016)
ISX_REF 		0.667 0.421
Isx
M00452_2.00 		Mus musculus
NNHDATNN
NNATHDNN		 PBM
Berger et al.(2008)
Isx_3445 		0.667 0.421
ISX
M03218_2.00 		Homo sapiens
NTAATTARATTAN
NTAATYTAATTAN		 SELEX
Jolma et al.(2013)
ISX_1 		0.667 0.421
ISX
M03219_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Jolma et al.(2013)
ISX_2 		0.667 0.421
ISX
M03220_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
ISX_3 		0.667 0.421
ISX
M05304_2.00 		Homo sapiens
BTAATTRG
CYAATTAV		 SELEX
Yin et al.(2017)
ISX_eDBD_HT-SELEX 		0.667 0.421
ISX
M05307_2.00 		Homo sapiens
YTAATTRS
SYAATTAR		 SELEX
Yin et al.(2017)
ISX_FL_HT-SELEX 		0.667 0.421
ISX
M00318_2.00 		Homo sapiens
DTAATTRK
MYAATTAH		 PBM
Barrera et al.(2016)
ISX_R83Q 		0.667 0.421
ISX
M05305_2.00 		Homo sapiens
NTAATTAG
CTAATTAN		 SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_1 		0.667 0.421
ISX
M05306_2.00 		Homo sapiens
HTAAYGHN
NDCRTTAD		 SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_2 		0.667 0.421
ISX
M05308_2.00 		Homo sapiens
YTAATTRS
SYAATTAR		 SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_1 		0.667 0.421
ISX
M05309_2.00 		Homo sapiens
HTAAYGHN
NDCRTTAD		 SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_2 		0.667 0.421
CG11294
M03855_2.00 		Drosophila melanogaster
TAATTVVATTA
TAATBBAATTA		 SELEX
Nitta et al.(2015)
CG11294_1 		0.666 0.439
CG11294
M03856_2.00 		Drosophila melanogaster
TAATTDVATTA
TAATBHAATTA		 SELEX
Nitta et al.(2015)
CG11294_2 		0.666 0.439
CG11294
M06531_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Mathelier et al.(2014)
MA0172.1 		0.666 0.439
CG11294
M06337_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Zhu et al.(2011)
CG11294_Cell_FBgn0030058 		0.666 0.439
CG11294
M06338_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG11294_SOLEXA_FBgn0030058 		0.666 0.439
PHDP
M03849_2.00 		Drosophila melanogaster
NTAATKNVATTAN
NTAATBNMATTAN		 SELEX
Nitta et al.(2015)
PHDP_1 		0.666 0.386
PHDP
M06525_2.00 		Drosophila melanogaster
HTAATTD
HAATTAD		 B1H
Mathelier et al.(2014)
MA0457.1 		0.666 0.386
PHDP
M06325_2.00 		Drosophila melanogaster
HTAATT
AATTAD		 B1H
Zhu et al.(2011)
PhdP_Cell_FBgn0025334 		0.666 0.386
PHDP
M06326_2.00 		Drosophila melanogaster
YTAATT
AATTAR		 B1H
Zhu et al.(2011)
PhdP_SOLEXA_FBgn0025334 		0.666 0.386
VSX1
M00267_2.00 		Homo sapiens
NNHAAYNNN
NNNRTTDNN		 PBM
Barrera et al.(2016)
VSX1_Q175H 		0.665 0.386
Vsx2
M02130_2.00 		Drosophila melanogaster
TTAATTAB
VTAATTAA		 PBM
Weirauch et al.(2014)
pTH6195 		0.656 0.386
Vsx2
M03880_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Vsx2_1 		0.656 0.386
Vsx2
M03881_2.00 		Drosophila melanogaster
HRAYNVNNTRATKD
HMATYANNBNRTYD		 SELEX
Nitta et al.(2015)
Vsx2_2 		0.656 0.386
Vsx2
M06553_2.00 		Drosophila melanogaster
KTTAATTAG
CTAATTAAM		 B1H
Mathelier et al.(2014)
MA0180.1 		0.656 0.386
Vsx2
M06382_2.00 		Drosophila melanogaster
KTTAATTAG
CTAATTAAM		 B1H
Zhu et al.(2011)
CG33980_Cell_FBgn0053980 		0.656 0.386
Vsx2
M06383_2.00 		Drosophila melanogaster
NNTAATTRRN
NYYAATTANN		 B1H
Zhu et al.(2011)
CG33980_SOLEXA_2_0_FBgn0053980 		0.656 0.386
Vsx2
M06384_2.00 		Drosophila melanogaster
NNTAATKDN
NHMATTANN		 B1H
Zhu et al.(2011)
CG33980_SOLEXA_2_10_FBgn0053980 		0.656 0.386
Vsx2
M06385_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
CG33980_SOLEXA_FBgn0053980 		0.656 0.386
MIXL1
M03231_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
MIXL1_1 		0.655 0.386
MIXL1
M05359_2.00 		Homo sapiens
TAATBNVATTA
TAATBNVATTA		 SELEX
Yin et al.(2017)
MIXL1_FL_HT-SELEX 		0.655 0.386
MIXL1
M10747_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIXL1_02 		0.655 0.386
Mixl1
M10765_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIXL1_03 		0.655 0.386
MIXL1
M05360_2.00 		Homo sapiens
TAATYNRATTA
TAATYNRATTA		 SELEX
Yin et al.(2017)
MIXL1_FL_Methyl-HT-SELEX_1 		0.655 0.386
MIXL1
M05361_2.00 		Homo sapiens
TAATYDCRTTA
TAAYGHRATTA		 SELEX
Yin et al.(2017)
MIXL1_FL_Methyl-HT-SELEX_2 		0.655 0.386
RAX2
M03214_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
RAXL1_1 		0.653 0.456
Rax
M00426_2.00 		Mus musculus
NNTAATTRN
NYAATTANN		 PBM
Berger et al.(2008)
Rax_3443 		0.653 0.439
RAX
M03149_2.00 		Homo sapiens
NHTAATTRNN
NNYAATTADN		 SELEX
Jolma et al.(2013)
RAX_1 		0.653 0.439
Rx
M03840_2.00 		Drosophila melanogaster
BTAATTRV
BYAATTAV		 SELEX
Nitta et al.(2015)
Rx_1 		0.653 0.439
Rx
M03841_2.00 		Drosophila melanogaster
NTAATBNSATTAN
NTAATSNVATTAN		 SELEX
Nitta et al.(2015)
Rx_2 		0.653 0.439
RAX
M05142_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_HT-SELEX 		0.653 0.439
Rx
M06520_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0202.1 		0.653 0.439
Rx
M06317_2.00 		Drosophila melanogaster
VYTAATTR
YAATTARB		 B1H
Zhu et al.(2011)
Rx_Cell_FBgn0020617 		0.653 0.439
Rx
M06318_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Rx_SOLEXA_FBgn0020617 		0.653 0.439
Rax
M10773_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RAX_04 		0.653 0.439
RAX
M05143_2.00 		Homo sapiens
NTAAYRNN
NNYRTTAN		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_1 		0.653 0.439
RAX
M05144_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_2 		0.653 0.439
ENSCING00000016045
M02078_2.00 		Ciona intestinalis
NNYTAATTRGN
NCYAATTARNN		 PBM
Weirauch et al.(2014)
pTH6551 		0.653 0.351
ZFHX2
M02089_2.00 		Homo sapiens
NNTRATYANN
NNTRATYANN		 PBM
Weirauch et al.(2014)
pTH5642 		0.652 0.421
Q0N4F9_NEMVE
M02162_2.00 		Nematostella vectensis
DTAATTAK
MTAATTAH		 PBM
Weirauch et al.(2014)
pTH6150 		0.650 0.404
Prrx2
M00486_2.00 		Mus musculus
WRATNNN
NNNATYW		 PBM
Berger et al.(2008)
Prrx2_3072 		0.650 0.439
PRRX2
M03200_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
PRRX2_1 		0.650 0.439
Prrx2
M03277_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Prrx2_1 		0.650 0.439
CG9876
M03865_2.00 		Drosophila melanogaster
SVTVATBRSN
NSYVATBABS		 SELEX
Nitta et al.(2015)
CG9876_1 		0.650 0.439
CG9876
M03866_2.00 		Drosophila melanogaster
NTAATTRV
BYAATTAN		 SELEX
Nitta et al.(2015)
CG9876_2 		0.650 0.439
CG9876
M03867_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
CG9876_3 		0.650 0.439
CG9876
M03868_2.00 		Drosophila melanogaster
TAATTRVNTAATTR
YAATTANBYAATTA		 SELEX
Nitta et al.(2015)
CG9876_4 		0.650 0.439
PRRX2
M05262_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PRRX2_FL_HT-SELEX 		0.650 0.439
PRRX2
M05258_2.00 		Homo sapiens
NTNAYGHN
NDCRTNAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_1 		0.650 0.439
PRRX2
M05259_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_2 		0.650 0.439
CG9876
M06537_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0184.1 		0.650 0.439
CG9876
M06350_2.00 		Drosophila melanogaster
DBTAATTR
YAATTAVH		 B1H
Zhu et al.(2011)
CG9876_Cell_FBgn0034821 		0.650 0.439
CG9876
M06351_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG9876_SOLEXA_FBgn0034821 		0.650 0.439
PRRX2
M09156_2.00 		Homo sapiens
HTAATTR
YAATTAD		 Misc
Kulakovskiy et al.(2013)
PRRX2_HUMAN.H11MO.0.C 		0.650 0.439
Prrx2
M09207_2.00 		Mus musculus
HTAATTR
YAATTAD		 Misc
Kulakovskiy et al.(2013)
PRRX2_MOUSE.H11MO.0.C 		0.650 0.439
PRRX2
M10735_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRRX2_05 		0.650 0.439
PRRX2
M10776_2.00 		Sus scrofa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRX2_Q2 		0.650 0.439
Prrx2
M10767_2.00 		Mus musculus
HNVHTAATTRRNHNDW
WHNDNYYAATTADBND		 Transfac
Matys et al.(2006)
V$S8_01 		0.650 0.439
PRRX2
M05260_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_1 		0.650 0.439
PRRX2
M05261_2.00 		Homo sapiens
NTAATYRN
NYRATTAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_2 		0.650 0.439
PRRX2
M05263_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_1 		0.650 0.439
PRRX2
M05264_2.00 		Homo sapiens
HTAAYGHN
NDCRTTAD		 SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_2 		0.650 0.439
Prrx1
M00431_2.00 		Mus musculus
TAATTRNN
NNYAATTA		 PBM
Berger et al.(2008)
Prrx1_3442 		0.650 0.421
PRRX1
M03120_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
PRRX1_1 		0.650 0.421
PRRX1
M03121_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
PRRX1_2 		0.650 0.421
PRRX1
M03122_2.00 		Homo sapiens
TAATTVRRTTA
TAAYYBAATTA		 SELEX
Jolma et al.(2013)
PRRX1_3 		0.650 0.421
Prrx1
M10770_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PMX1_01 		0.650 0.421
PRRX1
M10675_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PMX1_Q6 		0.650 0.421
ESX1
M00292_2.00 		Homo sapiens
NNTAATNDN
NHNATTANN		 PBM
Barrera et al.(2016)
ESX1_REF 		0.649 0.439
ESX1
M03137_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ESX1_1 		0.649 0.439
ESX1
M03138_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ESX1_2 		0.649 0.439
ESX1
M05087_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ESX1_eDBD_HT-SELEX 		0.649 0.439
ESX1
M05089_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ESX1_FL_HT-SELEX 		0.649 0.439
ESX1
M05088_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ESX1_eDBD_Methyl-HT-SELEX 		0.649 0.439
ESX1
M05090_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ESX1_FL_Methyl-HT-SELEX 		0.649 0.439
Awh
M02121_2.00 		Drosophila melanogaster
NNTAATTANN
NNTAATTANN		 PBM
Weirauch et al.(2014)
pTH5759 		0.646 0.491
Awh
M03831_2.00 		Drosophila melanogaster
BTAATTRV
BYAATTAV		 SELEX
Nitta et al.(2015)
Awh_1 		0.646 0.491
Awh
M06513_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Mathelier et al.(2014)
MA0167.1 		0.646 0.491
Awh
M06303_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Zhu et al.(2011)
Awh_Cell_FBgn0013751 		0.646 0.491
Awh
M06304_2.00 		Drosophila melanogaster
YTAATKR
YMATTAR		 B1H
Zhu et al.(2011)
Awh_SOLEXA_FBgn0013751 		0.646 0.491
lim-4
M02182_2.00 		Caenorhabditis elegans
YTAATTRVN
NBYAATTAR		 PBM
Weirauch et al.(2014)
pTH6366 		0.646 0.456
LHX6
M02086_2.00 		Homo sapiens
NTRATTRN
NYAATYAN		 PBM
Weirauch et al.(2014)
pTH6556 		0.646 0.474
Lhx6
M00434_2.00 		Mus musculus
NTRATTRN
NYAATYAN		 PBM
Berger et al.(2008)
Lhx6_2272 		0.646 0.474
Lhx8
M00534_2.00 		Mus musculus
NNTRATKRN
NYMATYANN		 PBM
Berger et al.(2008)
Lhx8_2247 		0.646 0.474
Lhx6_CONSTRUCT
M00539_2.00 		PBM CONSTRUCTS
NNTRATTRN
NYAATYANN		 PBM
Berger et al.(2008)
Lhx6_3432 		0.646 0.474
LHX6
M03108_2.00 		Homo sapiens
VYTAATTAVB
VBTAATTARB		 SELEX
Jolma et al.(2013)
LHX6_1 		0.646 0.474
LHX6
M03109_2.00 		Homo sapiens
YAATYARYRCTAATTA
TAATTAGYRYTRATTR		 SELEX
Jolma et al.(2013)
LHX6_2 		0.646 0.474
LHX6
M03110_2.00 		Homo sapiens
TRATTGCAATYA
TRATTGCAATYA		 SELEX
Jolma et al.(2013)
LHX6_3 		0.646 0.474
Lhx8
M03288_2.00 		Mus musculus
BYRATYRVNNBTRATYRN
NYRATYAVNNBYRATYRV		 SELEX
Jolma et al.(2013)
Lhx8_1 		0.646 0.474
Lhx8
M03289_2.00 		Mus musculus
BYRATYRV
BYRATYRV		 SELEX
Jolma et al.(2013)
Lhx8_2 		0.646 0.474
Lhx8
M03290_2.00 		Mus musculus
TRATTGCAATYA
TRATTGCAATYA		 SELEX
Jolma et al.(2013)
Lhx8_3 		0.646 0.474
LHX6
M04992_2.00 		Homo sapiens
CTAATTRV
BYAATTAG		 SELEX
Yin et al.(2017)
LHX6_FL_HT-SELEX_1 		0.646 0.474
LHX6
M04993_2.00 		Homo sapiens
TRATTGCAATYA
TRATTGCAATYA		 SELEX
Yin et al.(2017)
LHX6_FL_HT-SELEX_2 		0.646 0.474
LHX8
M05210_2.00 		Homo sapiens
STAATTAN
NTAATTAS		 SELEX
Yin et al.(2017)
LHX8_FL_HT-SELEX_1 		0.646 0.474
LHX8
M05211_2.00 		Homo sapiens
TRATTGCAATYA
TRATTGCAATYA		 SELEX
Yin et al.(2017)
LHX8_FL_HT-SELEX_2 		0.646 0.474
LHX6
M05870_2.00 		Homo sapiens
NYTRATTR
YAATYARN		 SMiLE-seq
Isakova et al.(2017)
LHX6 		0.646 0.474
Lhx6
M09187_2.00 		Mus musculus
NYTGATTRV
BYAATCARN		 Misc
Kulakovskiy et al.(2013)
LHX6_MOUSE.H11MO.0.C 		0.646 0.474
LHX8
M10713_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX8_06 		0.646 0.474
LHX6
M04994_2.00 		Homo sapiens
STAATTAV
BTAATTAS		 SELEX
Yin et al.(2017)
LHX6_FL_Methyl-HT-SELEX_1 		0.646 0.474
LHX6
M04995_2.00 		Homo sapiens
HTAACGAG
CTCGTTAD		 SELEX
Yin et al.(2017)
LHX6_FL_Methyl-HT-SELEX_2 		0.646 0.474
LHX6
M04996_2.00 		Homo sapiens
TRATTGCAATYA
TRATTGCAATYA		 SELEX
Yin et al.(2017)
LHX6_FL_Methyl-HT-SELEX_3 		0.646 0.474
LHX8
M05212_2.00 		Homo sapiens
STAATYAN
NTRATTAS		 SELEX
Yin et al.(2017)
LHX8_FL_Methyl-HT-SELEX_1 		0.646 0.474
LHX8
M05213_2.00 		Homo sapiens
NTAACGAB
VTCGTTAN		 SELEX
Yin et al.(2017)
LHX8_FL_Methyl-HT-SELEX_2 		0.646 0.474
LHX8
M05214_2.00 		Homo sapiens
TRATTGCAATYA
TRATTGCAATYA		 SELEX
Yin et al.(2017)
LHX8_FL_Methyl-HT-SELEX_3 		0.646 0.474
VSX1
M00268_2.00 		Homo sapiens
NNWRAYNNN
NNNRTYWNN		 PBM
Barrera et al.(2016)
VSX1_R166Q 		0.644 0.386
HESX1
M00309_2.00 		Homo sapiens
HTAATTRGN
NCYAATTAD		 PBM
Barrera et al.(2016)
HESX1_REF 		0.643 0.404
P79681_ACIBE
M02200_2.00 		Acipenser baerii
DTAATTRB
VYAATTAH		 PBM
Weirauch et al.(2014)
pTH6156 		0.643 0.404
HESX1
M00306_2.00 		Homo sapiens
WRATDRNN
NNYHATYW		 PBM
Barrera et al.(2016)
HESX1_E149K 		0.643 0.404
HESX1
M00307_2.00 		Homo sapiens
TAATTRNN
NNYAATTA		 PBM
Barrera et al.(2016)
HESX1_N125S 		0.643 0.404
HESX1
M00308_2.00 		Homo sapiens
NATAHATRN
NYATDTATN		 PBM
Barrera et al.(2016)
HESX1_R160C 		0.643 0.386
Vsx1
M02129_2.00 		Drosophila melanogaster
VTTAATTRR
YYAATTAAB		 PBM
Weirauch et al.(2014)
pTH5821 		0.643 0.386
Vsx1
M03879_2.00 		Drosophila melanogaster
NTAATTRV
BYAATTAN		 SELEX
Nitta et al.(2015)
Vsx1_1 		0.643 0.386
Vsx1
M06552_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0181.1 		0.643 0.386
Vsx1
M06380_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
CG4136_Cell_FBgn0029775 		0.643 0.386
Vsx1
M06381_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG4136_SOLEXA_FBgn0029775 		0.643 0.386
OdsH
M03851_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
OdsH_1 		0.639 0.386
OdsH
M03852_2.00 		Drosophila melanogaster
TAATBNVATTA
TAATBNVATTA		 SELEX
Nitta et al.(2015)
OdsH_2 		0.639 0.386
OdsH
M06528_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0198.1 		0.639 0.386
OdsH
M06330_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Zhu et al.(2011)
Odsh_Cell_FBgn0026058 		0.639 0.386
OdsH
M06331_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
Odsh_SOLEXA_FBgn0026058 		0.639 0.386
PHOX2B
M00279_2.00 		Homo sapiens
NVTAATTRMNN
NNKYAATTABN		 PBM
Barrera et al.(2016)
PHOX2B_R100L 		0.638 0.386
unc-4
M03846_2.00 		Drosophila melanogaster
TAATTNAATTA
TAATTNAATTA		 SELEX
Nitta et al.(2015)
unc-4_1 		0.638 0.386
unc-4
M06523_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0250.1 		0.638 0.386
PHOX2B
M00278_2.00 		Homo sapiens
NNNNNRY
RYNNNNN		 PBM
Barrera et al.(2016)
PHOX2B_Q143R 		0.638 0.386
mixl1.S
M02233_2.00 		Xenopus laevis
NHTAATTAANN
NNTTAATTADN		 PBM
Weirauch et al.(2014)
pTH6163 		0.628 0.351
Q4RRY4_TETNG
M02169_2.00 		Tetraodon nigroviridis
NNYAATYAN
NTRATTRNN		 PBM
Weirauch et al.(2014)
pTH6326 		0.614 0.386
NOBOX
M02084_2.00 		Homo sapiens
NNHDATDRNN
NNYHATHDNN		 PBM
Weirauch et al.(2014)
pTH6448 		0.614 0.316
AAZ08039
M02221_2.00 		Xenopus tropicalis
NHTAATTRNN
NNYAATTADN		 PBM
Weirauch et al.(2014)
pTH5791 		0.614 0.316
Nobox
M00448_2.00 		Mus musculus
NHDABDRNN
NNYHVTHDN		 PBM
Berger et al.(2008)
Og2x_3719 		0.612 0.298
Nobox
M02688_2.00 		Mus musculus
TAATTRSB
VSYAATTA		 SELEX
Mathelier et al.(2014)
MA0125.1 		0.612 0.298
Nobox
M09194_2.00 		Mus musculus
HTAATTRVB
VBYAATTAD		 Misc
Kulakovskiy et al.(2013)
NOBOX_MOUSE.H11MO.0.C 		0.612 0.298
Nobox
M10766_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OG2_01 		0.612 0.298
SNAPOd2T00006145001
M02230_2.00 		Oikopleura dioica
NNTRATKRNN
NNYMATYANN		 PBM
Weirauch et al.(2014)
pTH5930 		0.611 0.404
ro
M06495_2.00 		Drosophila melanogaster
YTAATTA
TAATTAR		 B1H
Mathelier et al.(2014)
MA0241.1 		0.611 0.333
ro
M06264_2.00 		Drosophila melanogaster
NYTAATTA
TAATTARN		 B1H
Zhu et al.(2011)
Ro_Cell_FBgn0003267 		0.611 0.333
ro
M06265_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Ro_SOLEXA_FBgn0003267 		0.611 0.333
ENSTNIG00000017092
M02109_2.00 		Tetraodon nigroviridis
YYAATCAD
HTGATTRR		 PBM
Weirauch et al.(2014)
pTH6064 		0.609 0.386
CG18599
M06539_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Mathelier et al.(2014)
MA0177.1 		0.607 0.404
CG18599
M06354_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592 		0.607 0.404
CG18599
M06355_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592 		0.607 0.404
ceh-62
M02187_2.00 		Caenorhabditis elegans
NNYAATTRNN
NNYAATTRNN		 PBM
Weirauch et al.(2014)
pTH5492 		0.604 0.368
ceh-5
M02179_2.00 		Caenorhabditis elegans
NNTAATDDN
NHHATTANN		 PBM
Weirauch et al.(2014)
pTH6562 		0.603 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000006532 Homeodomain 186 242
ENSDARP00000119321 Homeodomain 88 118
ENSDARP00000123281 Homeodomain 88 144
ENSDARP00000133569 Homeodomain 167 223

Links

Other Homeodomain family TFs
Other Danio rerio TFs

5119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00001p00262320 Amborella trichopoda AMTR_s00001p00262320 I 0.000
AMTR_s00002p00243900 Amborella trichopoda AMTR_s00002p00243900 I 0.000
AMTR_s00009p00109990 Amborella trichopoda AMTR_s00009p00109990 I 0.000
AMTR_s00030p00173920 Amborella trichopoda AMTR_s00030p00173920 I 0.000
AMTR_s00165p00052010 Amborella trichopoda AMTR_s00165p00052010 I 0.000
BLH7 Arabidopsis thaliana AT2G16400 I 0.000
BLH4 Arabidopsis thaliana AT2G23760 I 0.000
BLH8 Arabidopsis thaliana AT2G27990 I 0.000
BLH1 Arabidopsis thaliana AT2G35940 I 0.000
BLH6 Arabidopsis thaliana AT4G34610 I 0.000
BLH2 Arabidopsis thaliana AT4G36870 I 0.000
BLH9 Arabidopsis thaliana AT5G02030 I 0.000
BEL1 Arabidopsis thaliana AT5G41410 I 0.000
BGIOSGA000492 Oryza indica BGIOSGA000492 I 0.000
BGIOSGA010051 Oryza indica BGIOSGA010051 I 0.000
BGIOSGA010052 Oryza indica BGIOSGA010052 I 0.000
BGIOSGA011390 Oryza indica BGIOSGA011390 I 0.000
BGIOSGA011748 Oryza indica BGIOSGA011748 I 0.000
BGIOSGA013510 Oryza indica BGIOSGA013510 I 0.000
BGIOSGA019968 Oryza indica BGIOSGA019968 I 0.000
BGIOSGA022158 Oryza indica BGIOSGA022158 I 0.000
BGIOSGA034459 Oryza indica BGIOSGA034459 I 0.000
BGIOSGA035766 Oryza indica BGIOSGA035766 I 0.000
BGIOSGA036588 Oryza indica BGIOSGA036588 I 0.000
BGIOSGA036589 Oryza indica BGIOSGA036589 I 0.000
Bo1g005330 Brassica oleracea Bo1g005330 I 0.000
Bo1g008580 Brassica oleracea Bo1g008580 I 0.000
Bo2g002450 Brassica oleracea Bo2g002450 I 0.000
Bo3g001690 Brassica oleracea Bo3g001690 I 0.000
Bo3g029830 Brassica oleracea Bo3g029830 I 0.000
Bo3g153820 Brassica oleracea Bo3g153820 I 0.000
Bo4g036190 Brassica oleracea Bo4g036190 I 0.000
Bo4g151860 Brassica oleracea Bo4g151860 I 0.000
Bo4g185820 Brassica oleracea Bo4g185820 I 0.000
Bo7g018650 Brassica oleracea Bo7g018650 I 0.000
Bo7g116960 Brassica oleracea Bo7g116960 I 0.000
Bo8g100290 Brassica oleracea Bo8g100290 I 0.000
Bo9g184860 Brassica oleracea Bo9g184860 I 0.000
Bra005310 Brassica rapa Bra005310 I 0.000
Bra005703 Brassica rapa Bra005703 I 0.000
Bra009618 Brassica rapa Bra009618 I 0.000
Bra010577 Brassica rapa Bra010577 I 0.000
Bra011713 Brassica rapa Bra011713 I 0.000
Bra013075 Brassica rapa Bra013075 I 0.000
Bra013076 Brassica rapa Bra013076 I 0.000
Bra017277 Brassica rapa Bra017277 I 0.000
Bra017666 Brassica rapa Bra017666 I 0.000
Bra023045 Brassica rapa Bra023045 I 0.000
Bra028883 Brassica rapa Bra028883 I 0.000
Bra032147 Brassica rapa Bra032147 I 0.000
Bra039212 Brassica rapa Bra039212 I 0.000
BRADI1G09615 Brachypodium distachyon BRADI1G09615 I 0.000
BRADI1G12510 Brachypodium distachyon BRADI1G12510 I 0.000
BRADI1G12520 Brachypodium distachyon BRADI1G12520 I 0.000
BRADI1G51980 Brachypodium distachyon BRADI1G51980 I 0.000
BRADI1G76940 Brachypodium distachyon BRADI1G76940 I 0.000
BRADI2G23530 Brachypodium distachyon BRADI2G23530 I 0.000
BRADI2G54940 Brachypodium distachyon BRADI2G54940 I 0.000
BRADI3G26690 Brachypodium distachyon BRADI3G26690 I 0.000
BRADI3G32040 Brachypodium distachyon BRADI3G32040 I 0.000
BRADI4G00740 Brachypodium distachyon BRADI4G00740 I 0.000
F775_11482 Aegilops tauschii F775_11482 I 0.000
F775_13316 Aegilops tauschii F775_13316 I 0.000
F775_15470 Aegilops tauschii F775_15470 I 0.000
F775_16037 Aegilops tauschii F775_16037 I 0.000
F775_17983 Aegilops tauschii F775_17983 I 0.000
F775_18344 Aegilops tauschii F775_18344 I 0.000
F775_19160 Aegilops tauschii F775_19160 I 0.000
F775_27987 Aegilops tauschii F775_27987 I 0.000
BLH2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7000308 I 0.000
BLH7 Arabidopsis lyrata fgenesh2_kg.3__3505__AT2G16400.1 I 0.000
BLH1 Arabidopsis lyrata fgenesh2_kg.4__1624__AT2G35940.3 I 0.000
BLH8 Arabidopsis lyrata fgenesh2_kg.4__769__AT2G27990.1 I 0.000
LSN Arabidopsis lyrata fgenesh2_kg.6__114__AT5G02030.1 I 0.000
BEL1 Arabidopsis lyrata fgenesh2_kg.7__3270__AT5G41410.1 I 0.000
GLYMA01G25710 Glycine max GLYMA01G25710 I 0.000
GLYMA01G38650 Glycine max GLYMA01G38650 I 0.000
GLYMA01G43040 Glycine max GLYMA01G43040 I 0.000
GLYMA02G06730 Glycine max GLYMA02G06730 I 0.000
GLYMA02G35450 Glycine max GLYMA02G35450 I 0.000
GLYMA03G17397 Glycine max GLYMA03G17397 I 0.000
GLYMA03G36070 Glycine max GLYMA03G36070 I 0.000
GLYMA04G01151 Glycine max GLYMA04G01151 I 0.000
GLYMA04G05361 Glycine max GLYMA04G05361 I 0.000
GLYMA06G01186 Glycine max GLYMA06G01186 I 0.000
GLYMA10G10040 Glycine max GLYMA10G10040 I 0.000
GLYMA11G02450 Glycine max GLYMA11G02450 I 0.000
GLYMA11G06640 Glycine max GLYMA11G06640 I 0.000
GLYMA11G18270 Glycine max GLYMA11G18270 I 0.000
GLYMA12G10030 Glycine max GLYMA12G10030 I 0.000
GLYMA12G31480 Glycine max GLYMA12G31480 I 0.000
GLYMA13G38910 Glycine max GLYMA13G38910 I 0.000
GLYMA16G25770 Glycine max GLYMA16G25770 I 0.000
GLYMA18G41280 Glycine max GLYMA18G41280 I 0.000
GLYMA19G38690 Glycine max GLYMA19G38690 I 0.000
GRMZM2G004641 Zea mays GRMZM2G004641 I 0.000
GRMZM2G013617 Zea mays GRMZM2G013617 I 0.000
GRMZM2G064466 Zea mays GRMZM2G064466 I 0.000
GRMZM2G074645 Zea mays GRMZM2G074645 I 0.000
GRMZM2G099319 Zea mays GRMZM2G099319 I 0.000
GRMZM2G125976 Zea mays GRMZM2G125976 I 0.000
GRMZM2G154641 Zea mays GRMZM2G154641 I 0.000
GRMZM2G163761 Zea mays GRMZM2G163761 I 0.000
GRMZM2G327059 Zea mays GRMZM2G327059 I 0.000
GRMZM2G396114 Zea mays GRMZM2G396114 I 0.000
GRMZM2G458728 Zea mays GRMZM2G458728 I 0.000
GSMUA_Achr10G02340_001 Musa acuminata GSMUA_Achr10G02340_001 I 0.000
GSMUA_Achr10G06670_001 Musa acuminata GSMUA_Achr10G06670_001 I 0.000
GSMUA_Achr10G09410_001 Musa acuminata GSMUA_Achr10G09410_001 I 0.000
GSMUA_Achr10G22520_001 Musa acuminata GSMUA_Achr10G22520_001 I 0.000
GSMUA_Achr11G07620_001 Musa acuminata GSMUA_Achr11G07620_001 I 0.000
GSMUA_Achr1G06400_001 Musa acuminata GSMUA_Achr1G06400_001 I 0.000
GSMUA_Achr1G23300_001 Musa acuminata GSMUA_Achr1G23300_001 I 0.000
GSMUA_Achr2G04310_001 Musa acuminata GSMUA_Achr2G04310_001 I 0.000
GSMUA_Achr2G06410_001 Musa acuminata GSMUA_Achr2G06410_001 I 0.000
GSMUA_Achr2G06420_001 Musa acuminata GSMUA_Achr2G06420_001 I 0.000
GSMUA_Achr3G29230_001 Musa acuminata GSMUA_Achr3G29230_001 I 0.000
GSMUA_Achr4G07450_001 Musa acuminata GSMUA_Achr4G07450_001 I 0.000
GSMUA_Achr4G13590_001 Musa acuminata GSMUA_Achr4G13590_001 I 0.000
GSMUA_Achr4G14670_001 Musa acuminata GSMUA_Achr4G14670_001 I 0.000
GSMUA_Achr5G03140_001 Musa acuminata GSMUA_Achr5G03140_001 I 0.000
GSMUA_Achr5G07020_001 Musa acuminata GSMUA_Achr5G07020_001 I 0.000
GSMUA_Achr5G08840_001 Musa acuminata GSMUA_Achr5G08840_001 I 0.000
GSMUA_Achr6G18180_001 Musa acuminata GSMUA_Achr6G18180_001 I 0.000
GSMUA_Achr7G14960_001 Musa acuminata GSMUA_Achr7G14960_001 I 0.000
GSMUA_Achr7G27440_001 Musa acuminata GSMUA_Achr7G27440_001 I 0.000
GSMUA_Achr9G21580_001 Musa acuminata GSMUA_Achr9G21580_001 I 0.000
LPERR01G31990 Leersia perrieri LPERR01G31990 I 0.000
LPERR03G01710 Leersia perrieri LPERR03G01710 I 0.000
LPERR03G04270 Leersia perrieri LPERR03G04270 I 0.000
LPERR03G24420 Leersia perrieri LPERR03G24420 I 0.000
LPERR03G24430 Leersia perrieri LPERR03G24430 I 0.000
LPERR03G27630 Leersia perrieri LPERR03G27630 I 0.000
LPERR05G14820 Leersia perrieri LPERR05G14820 I 0.000
LPERR06G00490 Leersia perrieri LPERR06G00490 I 0.000
LPERR11G03280 Leersia perrieri LPERR11G03280 I 0.000
LPERR12G16760 Leersia perrieri LPERR12G16760 I 0.000
MLOC_36385 Hordeum vulgare MLOC_36385 I 0.000
MLOC_3638 Hordeum vulgare MLOC_3638 I 0.000
MLOC_53364 Hordeum vulgare MLOC_53364 I 0.000
MLOC_5414 Hordeum vulgare MLOC_5414 I 0.000
MLOC_58467 Hordeum vulgare MLOC_58467 I 0.000
MLOC_62535 Hordeum vulgare MLOC_62535 I 0.000
MLOC_66099 Hordeum vulgare MLOC_66099 I 0.000
MLOC_68213 Hordeum vulgare MLOC_68213 I 0.000
MLOC_73862 Hordeum vulgare MLOC_73862 I 0.000
MTR_1g057790 Medicago truncatula MTR_1g057790 I 0.000
MTR_4g019450 Medicago truncatula MTR_4g019450 I 0.000
MTR_4g051532 Medicago truncatula MTR_4g051532 I 0.000
MTR_5g018860 Medicago truncatula MTR_5g018860 I 0.000
MTR_7g065050 Medicago truncatula MTR_7g065050 I 0.000
MTR_7g106320 Medicago truncatula MTR_7g106320 I 0.000
MTR_8g078480 Medicago truncatula MTR_8g078480 I 0.000
MTR_8g098815 Medicago truncatula MTR_8g098815 I 0.000
OB01G45990 Oryza brachyantha OB01G45990 I 0.000
OB02G18330 Oryza brachyantha OB02G18330 I 0.000
OB03G11840 Oryza brachyantha OB03G11840 I 0.000
OB03G14910 Oryza brachyantha OB03G14910 I 0.000
OB03G36850 Oryza brachyantha OB03G36850 I 0.000
OB03G36860 Oryza brachyantha OB03G36860 I 0.000
OB03G40160 Oryza brachyantha OB03G40160 I 0.000
OB05G26540 Oryza brachyantha OB05G26540 I 0.000
OB06G10590 Oryza brachyantha OB06G10590 I 0.000
OB11G13180 Oryza brachyantha OB11G13180 I 0.000
OB12G26670 Oryza brachyantha OB12G26670 I 0.000
OBART01G37260 Oryza barthii OBART01G37260 I 0.000
OBART03G29660 Oryza barthii OBART03G29660 I 0.000
OBART03G29670 Oryza barthii OBART03G29670 I 0.000
OBART03G33050 Oryza barthii OBART03G33050 I 0.000
OBART05G18940 Oryza barthii OBART05G18940 I 0.000
OBART06G00550 Oryza barthii OBART06G00550 I 0.000
OBART11G03800 Oryza barthii OBART11G03800 I 0.000
OBART12G19980 Oryza barthii OBART12G19980 I 0.000
OGLUM01G41200 Oryza glumaepatula OGLUM01G41200 I 0.000
OGLUM03G04700 Oryza glumaepatula OGLUM03G04700 I 0.000
OGLUM03G29920 Oryza glumaepatula OGLUM03G29920 I 0.000
OGLUM03G29930 Oryza glumaepatula OGLUM03G29930 I 0.000
OGLUM03G32710 Oryza glumaepatula OGLUM03G32710 I 0.000
OGLUM05G19970 Oryza glumaepatula OGLUM05G19970 I 0.000
OGLUM06G00470 Oryza glumaepatula OGLUM06G00470 I 0.000
OGLUM10G16890 Oryza glumaepatula OGLUM10G16890 I 0.000
OGLUM11G03520 Oryza glumaepatula OGLUM11G03520 I 0.000
OGLUM12G04370 Oryza glumaepatula OGLUM12G04370 I 0.000
OGLUM12G21720 Oryza glumaepatula OGLUM12G21720 I 0.000
OLONG_001344 Oryza longistaminata OLONG_001344 I 0.000
OLONG_010053 Oryza longistaminata OLONG_010053 I 0.000
OLONG_023229 Oryza longistaminata OLONG_023229 I 0.000
OLONG_026942 Oryza longistaminata OLONG_026942 I 0.000
OLONG_026943 Oryza longistaminata OLONG_026943 I 0.000
OMERI01G34260 Oryza meridionalis OMERI01G34260 I 0.000
OMERI03G01810 Oryza meridionalis OMERI03G01810 I 0.000
OMERI03G04590 Oryza meridionalis OMERI03G04590 I 0.000
OMERI03G25970 Oryza meridionalis OMERI03G25970 I 0.000
OMERI03G29690 Oryza meridionalis OMERI03G29690 I 0.000
OMERI05G16460 Oryza meridionalis OMERI05G16460 I 0.000
OMERI06G00490 Oryza meridionalis OMERI06G00490 I 0.000
OMERI11G03470 Oryza meridionalis OMERI11G03470 I 0.000
OMERI12G01910 Oryza meridionalis OMERI12G01910 I 0.000
OMERI12G14700 Oryza meridionalis OMERI12G14700 I 0.000
ONIVA01G42140 Oryza nivara ONIVA01G42140 I 0.000
ONIVA03G04660 Oryza nivara ONIVA03G04660 I 0.000
ONIVA03G07310 Oryza nivara ONIVA03G07310 I 0.000
ONIVA03G30930 Oryza nivara ONIVA03G30930 I 0.000
ONIVA03G34560 Oryza nivara ONIVA03G34560 I 0.000
ONIVA05G19780 Oryza nivara ONIVA05G19780 I 0.000
ONIVA06G00550 Oryza nivara ONIVA06G00550 I 0.000
ONIVA10G18590 Oryza nivara ONIVA10G18590 I 0.000
ONIVA11G03780 Oryza nivara ONIVA11G03780 I 0.000
ONIVA12G03330 Oryza nivara ONIVA12G03330 I 0.000
OPUNC01G36100 Oryza punctata OPUNC01G36100 I 0.000
OPUNC03G01710 Oryza punctata OPUNC03G01710 I 0.000
OPUNC03G04600 Oryza punctata OPUNC03G04600 I 0.000
OPUNC03G27010 Oryza punctata OPUNC03G27010 I 0.000
OPUNC03G27020 Oryza punctata OPUNC03G27020 I 0.000
OPUNC03G30190 Oryza punctata OPUNC03G30190 I 0.000
OPUNC05G16530 Oryza punctata OPUNC05G16530 I 0.000
OPUNC06G00480 Oryza punctata OPUNC06G00480 I 0.000
OPUNC10G15240 Oryza punctata OPUNC10G15240 I 0.000
OPUNC11G03550 Oryza punctata OPUNC11G03550 I 0.000
OPUNC12G03540 Oryza punctata OPUNC12G03540 I 0.000
OPUNC12G18250 Oryza punctata OPUNC12G18250 I 0.000
OPUNC12G18270 Oryza punctata OPUNC12G18270 I 0.000
ORGLA01G0311100 Oryza glaberrima ORGLA01G0311100 I 0.000
ORGLA03G0016400 Oryza glaberrima ORGLA03G0016400 I 0.000
ORGLA03G0046500 Oryza glaberrima ORGLA03G0046500 I 0.000
ORGLA03G0273800 Oryza glaberrima ORGLA03G0273800 I 0.000
ORGLA03G0273900 Oryza glaberrima ORGLA03G0273900 I 0.000
ORGLA05G0163600 Oryza glaberrima ORGLA05G0163600 I 0.000
ORGLA06G0005600 Oryza glaberrima ORGLA06G0005600 I 0.000
ORGLA11G0035300 Oryza glaberrima ORGLA11G0035300 I 0.000
ORGLA12G0172800 Oryza glaberrima ORGLA12G0172800 I 0.000
ORUFI01G40590 Oryza rufipogon ORUFI01G40590 I 0.000
ORUFI03G04600 Oryza rufipogon ORUFI03G04600 I 0.000
ORUFI03G30870 Oryza rufipogon ORUFI03G30870 I 0.000
ORUFI03G34420 Oryza rufipogon ORUFI03G34420 I 0.000
ORUFI05G20120 Oryza rufipogon ORUFI05G20120 I 0.000
ORUFI06G00570 Oryza rufipogon ORUFI06G00570 I 0.000
ORUFI12G04260 Oryza rufipogon ORUFI12G04260 I 0.000
ORUFI12G22300 Oryza rufipogon ORUFI12G22300 I 0.000
OS01G0848400 Oryza sativa OS01G0848400 I 0.000
OS03G0124000 Oryza sativa OS03G0124000 I 0.000
OS03G0165300 Oryza sativa OS03G0165300 I 0.000
OS03G0680700 Oryza sativa OS03G0680700 I 0.000
OS03G0680800 Oryza sativa OS03G0680800 I 0.000
OS03G0732100 Oryza sativa OS03G0732100 I 0.000
OS05G0455200 Oryza sativa OS05G0455200 I 0.000
OS06G0108900 Oryza sativa OS06G0108900 I 0.000
OS12G0636200 Oryza sativa OS12G0636200 I 0.000
PGSC0003DMG400005930 Solanum tuberosum PGSC0003DMG400005930 I 0.000
PGSC0003DMG400008057 Solanum tuberosum PGSC0003DMG400008057 I 0.000
PGSC0003DMG400010086 Solanum tuberosum PGSC0003DMG400010086 I 0.000
PGSC0003DMG400012329 Solanum tuberosum PGSC0003DMG400012329 I 0.000
PGSC0003DMG400019142 Solanum tuberosum PGSC0003DMG400019142 I 0.000
PGSC0003DMG400019635 Solanum tuberosum PGSC0003DMG400019635 I 0.000
PGSC0003DMG400021323 Solanum tuberosum PGSC0003DMG400021323 I 0.000
PGSC0003DMG400024267 Solanum tuberosum PGSC0003DMG400024267 I 0.000
PGSC0003DMG400030961 Solanum tuberosum PGSC0003DMG400030961 I 0.000
POPTR_0001s22430 Populus trichocarpa POPTR_0001s22430 I 0.000
POPTR_0003s13120 Populus trichocarpa POPTR_0003s13120 I 0.000
POPTR_0004s16660 Populus trichocarpa POPTR_0004s16660 I 0.000
POPTR_0004s22320 Populus trichocarpa POPTR_0004s22320 I 0.000
POPTR_0005s13780 Populus trichocarpa POPTR_0005s13780 I 0.000
POPTR_0006s21950 Populus trichocarpa POPTR_0006s21950 I 0.000
POPTR_0007s12170 Populus trichocarpa POPTR_0007s12170 I 0.000
POPTR_0008s06130 Populus trichocarpa POPTR_0008s06130 I 0.000
POPTR_0009s01530 Populus trichocarpa POPTR_0009s01530 I 0.000
POPTR_0009s02250 Populus trichocarpa POPTR_0009s02250 I 0.000
POPTR_0009s12360 Populus trichocarpa POPTR_0009s12360 I 0.000
POPTR_0010s20480 Populus trichocarpa POPTR_0010s20480 I 0.000
POPTR_0016s07040 Populus trichocarpa POPTR_0016s07040 I 0.000
PRUPE_ppa001286mg Prunus persica PRUPE_ppa001286mg I 0.000
PRUPE_ppa002081mg Prunus persica PRUPE_ppa002081mg I 0.000
PRUPE_ppa002158mg Prunus persica PRUPE_ppa002158mg I 0.000
PRUPE_ppa002499mg Prunus persica PRUPE_ppa002499mg I 0.000
PRUPE_ppa002583mg Prunus persica PRUPE_ppa002583mg I 0.000
PRUPE_ppa002604mg Prunus persica PRUPE_ppa002604mg I 0.000
Sb01g009130 Sorghum bicolor Sb01g009130 I 0.000
Sb01g030620 Sorghum bicolor Sb01g030620 I 0.000
Sb01g046170 Sorghum bicolor Sb01g046170 I 0.000
Sb03g039840 Sorghum bicolor Sb03g039840 I 0.000
Sb05g003750 Sorghum bicolor Sb05g003750 I 0.000
Sb08g022960 Sorghum bicolor Sb08g022960 I 0.000
Sb09g022270 Sorghum bicolor Sb09g022270 I 0.000
Sb10g000800 Sorghum bicolor Sb10g000800 I 0.000
BLH4 Arabidopsis lyrata scaffold_400362.1 I 0.000
BLH6 Arabidopsis lyrata scaffold_700666.1 I 0.000
SELMODRAFT_414952 Selaginella moellendorffii SELMODRAFT_414952 I 0.000
Si000753m.g Setaria italica Si000753m.g I 0.000
Si006303m.g Setaria italica Si006303m.g I 0.000
Si021436m.g Setaria italica Si021436m.g I 0.000
Si021626m.g Setaria italica Si021626m.g I 0.000
Si026085m.g Setaria italica Si026085m.g I 0.000
Si034720m.g Setaria italica Si034720m.g I 0.000
Si034832m.g Setaria italica Si034832m.g I 0.000
Si034965m.g Setaria italica Si034965m.g I 0.000
Si036329m.g Setaria italica Si036329m.g I 0.000
Solyc01g007070.2 Solanum lycopersicum Solyc01g007070.2 I 0.000
Solyc01g109980.2 Solanum lycopersicum Solyc01g109980.2 I 0.000
Solyc02g089940.2 Solanum lycopersicum Solyc02g089940.2 I 0.000
Solyc04g080780.2 Solanum lycopersicum Solyc04g080780.2 I 0.000
Solyc06g074120.2 Solanum lycopersicum Solyc06g074120.2 I 0.000
Solyc08g081400.2 Solanum lycopersicum Solyc08g081400.2 I 0.000
Solyc09g011380.2 Solanum lycopersicum Solyc09g011380.2 I 0.000
Solyc11g068950.1 Solanum lycopersicum Solyc11g068950.1 I 0.000
Solyc11g069890.1 Solanum lycopersicum Solyc11g069890.1 I 0.000
TCM_000479 Theobroma cacao TCM_000479 I 0.000
TCM_006827 Theobroma cacao TCM_006827 I 0.000
TCM_016315 Theobroma cacao TCM_016315 I 0.000
TCM_021834 Theobroma cacao TCM_021834 I 0.000
TCM_022950 Theobroma cacao TCM_022950 I 0.000
TCM_041235 Theobroma cacao TCM_041235 I 0.000
TCM_042663 Theobroma cacao TCM_042663 I 0.000
Traes_1AL_D36224AD9 Triticum aestivum Traes_1AL_D36224AD9 I 0.000
Traes_1BL_0E29B6971 Triticum aestivum Traes_1BL_0E29B6971 I 0.000
Traes_1BL_2DCDCD191 Triticum aestivum Traes_1BL_2DCDCD191 I 0.000
Traes_1DL_2C7481DB3 Triticum aestivum Traes_1DL_2C7481DB3 I 0.000
Traes_3AL_8260356E3 Triticum aestivum Traes_3AL_8260356E3 I 0.000
TRAES3BF107700050CFD_g Triticum aestivum TRAES3BF107700050CFD_g I 0.000
Traes_4AL_00DB56D41 Triticum aestivum Traes_4AL_00DB56D41 I 0.000
Traes_4AL_405CA738F Triticum aestivum Traes_4AL_405CA738F I 0.000
Traes_4AL_7B4A6F76A Triticum aestivum Traes_4AL_7B4A6F76A I 0.000
Traes_4AL_A5BC0BDBA Triticum aestivum Traes_4AL_A5BC0BDBA I 0.000
Traes_4BL_0F02B2343 Triticum aestivum Traes_4BL_0F02B2343 I 0.000
Traes_4BS_20BE06923 Triticum aestivum Traes_4BS_20BE06923 I 0.000
Traes_4BS_3DB087DC8 Triticum aestivum Traes_4BS_3DB087DC8 I 0.000
Traes_4BS_5156DD076 Triticum aestivum Traes_4BS_5156DD076 I 0.000
Traes_4BS_57F165BB1 Triticum aestivum Traes_4BS_57F165BB1 I 0.000
Traes_4DL_4164D3F4C Triticum aestivum Traes_4DL_4164D3F4C I 0.000
Traes_4DS_009CBDD14 Triticum aestivum Traes_4DS_009CBDD14 I 0.000
Traes_4DS_35269C392 Triticum aestivum Traes_4DS_35269C392 I 0.000
Traes_4DS_4BD85B5C7 Triticum aestivum Traes_4DS_4BD85B5C7 I 0.000
Traes_4DS_581BE0CB7 Triticum aestivum Traes_4DS_581BE0CB7 I 0.000
Traes_5AS_B2606FAD3 Triticum aestivum Traes_5AS_B2606FAD3 I 0.000
Traes_5BS_210B7C3A4 Triticum aestivum Traes_5BS_210B7C3A4 I 0.000
Traes_5DS_8E2AF4F8B Triticum aestivum Traes_5DS_8E2AF4F8B I 0.000
Traes_7AS_FED21D983 Triticum aestivum Traes_7AS_FED21D983 I 0.000
Traes_7BL_7E32A8329 Triticum aestivum Traes_7BL_7E32A8329 I 0.000
Traes_7DS_86586E87F Triticum aestivum Traes_7DS_86586E87F I 0.000
TRIUR3_05123 Triticum urartu TRIUR3_05123 I 0.000
TRIUR3_09679 Triticum urartu TRIUR3_09679 I 0.000
TRIUR3_16344 Triticum urartu TRIUR3_16344 I 0.000
TRIUR3_18920 Triticum urartu TRIUR3_18920 I 0.000
TRIUR3_26361 Triticum urartu TRIUR3_26361 I 0.000
TRIUR3_28848 Triticum urartu TRIUR3_28848 I 0.000
TRIUR3_32159 Triticum urartu TRIUR3_32159 I 0.000
BEL1 Vitis vinifera VIT_02s0025g00200 I 0.000
VIT_03s0038g00050 Vitis vinifera VIT_03s0038g00050 I 0.000
VIT_04s0023g01020 Vitis vinifera VIT_04s0023g01020 I 0.000
BLH5 Vitis vinifera VIT_06s0009g00410 I 0.000
LSN Vitis vinifera VIT_08s0007g01290 I 0.000
BLH1 Vitis vinifera VIT_08s0105g00230 I 0.000
Ca_00859 Cicer arietinum Ca_00859 I 0.000
Ca_02095 Cicer arietinum Ca_02095 I 0.000
Ca_14437 Cicer arietinum Ca_14437 I 0.000
Ca_15192 Cicer arietinum Ca_15192 I 0.000
Ca_16026 Cicer arietinum Ca_16026 I 0.000
Ca_21219 Cicer arietinum Ca_21219 I 0.000
Ca_25873 Cicer arietinum Ca_25873 I 0.000
Ca_25877 Cicer arietinum Ca_25877 I 0.000
Ca_26497 Cicer arietinum Ca_26497 I 0.000
Cla001806 Citrullus lanatus Cla001806 I 0.000
Cla016850 Citrullus lanatus Cla016850 I 0.000
Cla017896 Citrullus lanatus Cla017896 I 0.000
Cla018214 Citrullus lanatus Cla018214 I 0.000
Cla018449 Citrullus lanatus Cla018449 I 0.000
Cla020476 Citrullus lanatus Cla020476 I 0.000
Pm001514 Prunus mume Pm001514 I 0.000
Pm002609 Prunus mume Pm002609 I 0.000
Pm021823 Prunus mume Pm021823 I 0.000
Pm026023 Prunus mume Pm026023 I 0.000
29333.m001039 Ricinus communis 29333.m001039 I 0.000
29676.m001705 Ricinus communis 29676.m001705 I 0.000
29973.m000390 Ricinus communis 29973.m000390 I 0.000
30131.m007089 Ricinus communis 30131.m007089 I 0.000
30143.m001209 Ricinus communis 30143.m001209 I 0.000
30190.m011257 Ricinus communis 30190.m011257 I 0.000
cassava17913.valid.m1 Manihot esculenta cassava17913.valid.m1 I 0.000
cassava21874.m1 Manihot esculenta cassava21874.m1 I 0.000
cassava2208.valid.m1 Manihot esculenta cassava2208.valid.m1 I 0.000
cassava24236.valid.m1 Manihot esculenta cassava24236.valid.m1 I 0.000
cassava24237.valid.m1 Manihot esculenta cassava24237.valid.m1 I 0.000
cassava24238.valid.m1 Manihot esculenta cassava24238.valid.m1 I 0.000
cassava24239.valid.m1 Manihot esculenta cassava24239.valid.m1 I 0.000
cassava24240.valid.m1 Manihot esculenta cassava24240.valid.m1 I 0.000
cassava25006.valid.m1 Manihot esculenta cassava25006.valid.m1 I 0.000
cassava25008.valid.m1 Manihot esculenta cassava25008.valid.m1 I 0.000
cassava25009.valid.m1 Manihot esculenta cassava25009.valid.m1 I 0.000
cassava42275.valid.m1 Manihot esculenta cassava42275.valid.m1 I 0.000
cassava45286.m1 Manihot esculenta cassava45286.m1 I 0.000
cassava7169.valid.m1 Manihot esculenta cassava7169.valid.m1 I 0.000
cassava7170.valid.m1 Manihot esculenta cassava7170.valid.m1 I 0.000
Cucsa.101830 Cucumis sativus Cucsa.101830 I 0.000
Cucsa.175830 Cucumis sativus Cucsa.175830 I 0.000
Cucsa.185900 Cucumis sativus Cucsa.185900 I 0.000
Cucsa.241880 Cucumis sativus Cucsa.241880 I 0.000
Cucsa.303380 Cucumis sativus Cucsa.303380 I 0.000
fgenesh1_pg.scaffold_220000039 Physcomitrella patens fgenesh1_pg.scaffold_220000039 I 0.000
fgenesh1_pg.scaffold_258000001 Physcomitrella patens fgenesh1_pg.scaffold_258000001 I 0.000
mgf009310m Mimulus guttatus mgf009310m I 0.000
mgf014297m Mimulus guttatus mgf014297m I 0.000
Aquca_003_00184 Aquilegia coerulea Aquca_003_00184 I 0.000
Aquca_007_00122 Aquilegia coerulea Aquca_007_00122 I 0.000
Aquca_007_00310 Aquilegia coerulea Aquca_007_00310 I 0.000
Aquca_009_00697 Aquilegia coerulea Aquca_009_00697 I 0.000
Aquca_010_00398 Aquilegia coerulea Aquca_010_00398 I 0.000
Aquca_038_00103 Aquilegia coerulea Aquca_038_00103 I 0.000
Bostr.18351s0104 Boechera stricta Bostr.18351s0104 I 0.000
Bostr.23794s0501 Boechera stricta Bostr.23794s0501 I 0.000
Bostr.27991s0131 Boechera stricta Bostr.27991s0131 I 0.000
Bostr.28794s0018 Boechera stricta Bostr.28794s0018 I 0.000
Bostr.6251s0069 Boechera stricta Bostr.6251s0069 I 0.000
Bostr.7200s0155 Boechera stricta Bostr.7200s0155 I 0.000
Bostr.7867s1322 Boechera stricta Bostr.7867s1322 I 0.000
Bostr.7867s1543 Boechera stricta Bostr.7867s1543 I 0.000
Cagra.0808s0012 Capsella grandiflora Cagra.0808s0012 I 0.000
Cagra.0993s0106 Capsella grandiflora Cagra.0993s0106 I 0.000
Cagra.1873s0010 Capsella grandiflora Cagra.1873s0010 I 0.000
Cagra.2350s0011 Capsella grandiflora Cagra.2350s0011 I 0.000
Cagra.2637s0010 Capsella grandiflora Cagra.2637s0010 I 0.000
Cagra.4909s0013 Capsella grandiflora Cagra.4909s0013 I 0.000
Cagra.5224s0008 Capsella grandiflora Cagra.5224s0008 I 0.000
Carubv10000448m.g Capsella rubella Carubv10000448m.g I 0.000
Carubv10004235m.g Capsella rubella Carubv10004235m.g I 0.000
Carubv10004359m.g Capsella rubella Carubv10004359m.g I 0.000
Carubv10004551m.g Capsella rubella Carubv10004551m.g I 0.000
Carubv10013548m.g Capsella rubella Carubv10013548m.g I 0.000
Carubv10022772m.g Capsella rubella Carubv10022772m.g I 0.000
Carubv10022787m.g Capsella rubella Carubv10022787m.g I 0.000
Carubv10024860m.g Capsella rubella Carubv10024860m.g I 0.000
Ciclev10001116m.g Citrus clementina Ciclev10001116m.g I 0.000
Ciclev10011201m.g Citrus clementina Ciclev10011201m.g I 0.000
Ciclev10011268m.g Citrus clementina Ciclev10011268m.g I 0.000
Ciclev10019130m.g Citrus clementina Ciclev10019130m.g I 0.000
Ciclev10024897m.g Citrus clementina Ciclev10024897m.g I 0.000
Eucgr.A02588 Eucalyptus grandis Eucgr.A02588 I 0.000
Eucgr.D01826 Eucalyptus grandis Eucgr.D01826 I 0.000
Eucgr.I02488 Eucalyptus grandis Eucgr.I02488 I 0.000
Eucgr.J00574 Eucalyptus grandis Eucgr.J00574 I 0.000
Eucgr.K03046 Eucalyptus grandis Eucgr.K03046 I 0.000
evm.TU.supercontig_104.27 Carica papaya evm.TU.supercontig_104.27 I 0.000
evm.TU.supercontig_56.56 Carica papaya evm.TU.supercontig_56.56 I 0.000
evm.TU.supercontig_99.9 Carica papaya evm.TU.supercontig_99.9 I 0.000
gene18314-v1.0-hybrid Fragaria vesca gene18314-v1.0-hybrid I 0.000
gene20865-v1.0-hybrid Fragaria vesca gene20865-v1.0-hybrid I 0.000
gene29414-v1.0-hybrid Fragaria vesca gene29414-v1.0-hybrid I 0.000
Gorai.001G125400 Gossypium raimondii Gorai.001G125400 I 0.000
Gorai.002G234900 Gossypium raimondii Gorai.002G234900 I 0.000
Gorai.002G255800 Gossypium raimondii Gorai.002G255800 I 0.000
Gorai.003G018100 Gossypium raimondii Gorai.003G018100 I 0.000
Gorai.003G156000 Gossypium raimondii Gorai.003G156000 I 0.000
Gorai.004G139300 Gossypium raimondii Gorai.004G139300 I 0.000
Gorai.006G115600 Gossypium raimondii Gorai.006G115600 I 0.000
Gorai.006G149100 Gossypium raimondii Gorai.006G149100 I 0.000
Gorai.007G207200 Gossypium raimondii Gorai.007G207200 I 0.000
Gorai.008G248900 Gossypium raimondii Gorai.008G248900 I 0.000
Gorai.009G082700 Gossypium raimondii Gorai.009G082700 I 0.000
Gorai.009G396900 Gossypium raimondii Gorai.009G396900 I 0.000
Gorai.012G108300 Gossypium raimondii Gorai.012G108300 I 0.000
Lus10004201.g Linum usitatissimum Lus10004201.g I 0.000
Lus10013579.g Linum usitatissimum Lus10013579.g I 0.000
Lus10016110.g Linum usitatissimum Lus10016110.g I 0.000
Lus10021270.g Linum usitatissimum Lus10021270.g I 0.000
Lus10021452.g Linum usitatissimum Lus10021452.g I 0.000
Lus10021498.g Linum usitatissimum Lus10021498.g I 0.000
Lus10022485.g Linum usitatissimum Lus10022485.g I 0.000
Lus10022599.g Linum usitatissimum Lus10022599.g I 0.000
Lus10029405.g Linum usitatissimum Lus10029405.g I 0.000
Lus10040256.g Linum usitatissimum Lus10040256.g I 0.000
MDP0000143173 Malus domestica MDP0000143173 I 0.000
MDP0000209399 Malus domestica MDP0000209399 I 0.000
MDP0000300503 Malus domestica MDP0000300503 I 0.000
MDP0000429775 Malus domestica MDP0000429775 I 0.000
MDP0000546502 Malus domestica MDP0000546502 I 0.000
orange1.1g003323m.g Citrus sinensis orange1.1g003323m.g I 0.000
orange1.1g005058m.g Citrus sinensis orange1.1g005058m.g I 0.000
orange1.1g005514m.g Citrus sinensis orange1.1g005514m.g I 0.000
orange1.1g006550m.g Citrus sinensis orange1.1g006550m.g I 0.000
orange1.1g012938m.g Citrus sinensis orange1.1g012938m.g I 0.000
Pavir.Ea03389 Panicum virgatum Pavir.Ea03389 I 0.000
Pavir.Ha01822 Panicum virgatum Pavir.Ha01822 I 0.000
Pavir.Ia00979 Panicum virgatum Pavir.Ia00979 I 0.000
Pavir.Ia02908 Panicum virgatum Pavir.Ia02908 I 0.000
Pavir.Ia04290 Panicum virgatum Pavir.Ia04290 I 0.000
Pavir.Ib00072 Panicum virgatum Pavir.Ib00072 I 0.000
Pavir.Ib04220 Panicum virgatum Pavir.Ib04220 I 0.000
Pavir.J02888 Panicum virgatum Pavir.J02888 I 0.000
Pavir.J04807 Panicum virgatum Pavir.J04807 I 0.000
Pavir.J37847 Panicum virgatum Pavir.J37847 I 0.000
SapurV1A.0049s0270 Salix purpurea SapurV1A.0049s0270 I 0.000
SapurV1A.0098s0250 Salix purpurea SapurV1A.0098s0250 I 0.000
SapurV1A.0119s0060 Salix purpurea SapurV1A.0119s0060 I 0.000
SapurV1A.0146s0010 Salix purpurea SapurV1A.0146s0010 I 0.000
SapurV1A.0214s0100 Salix purpurea SapurV1A.0214s0100 I 0.000
SapurV1A.0216s0040 Salix purpurea SapurV1A.0216s0040 I 0.000
SapurV1A.0224s0160 Salix purpurea SapurV1A.0224s0160 I 0.000
SapurV1A.0319s0040 Salix purpurea SapurV1A.0319s0040 I 0.000
SapurV1A.0432s0150 Salix purpurea SapurV1A.0432s0150 I 0.000
SapurV1A.0681s0020 Salix purpurea SapurV1A.0681s0020 I 0.000
SapurV1A.1014s0020 Salix purpurea SapurV1A.1014s0020 I 0.000
SapurV1A.1280s0040 Salix purpurea SapurV1A.1280s0040 I 0.000
SapurV1A.1412s0040 Salix purpurea SapurV1A.1412s0040 I 0.000
SapurV1A.2239s0010 Salix purpurea SapurV1A.2239s0010 I 0.000
SapurV1A.5356s0010 Salix purpurea SapurV1A.5356s0010 I 0.000
Thhalv10000076m.g Eutrema salsugineum Thhalv10000076m.g I 0.000
Thhalv10012876m.g Eutrema salsugineum Thhalv10012876m.g I 0.000
Thhalv10016349m.g Eutrema salsugineum Thhalv10016349m.g I 0.000
Thhalv10022660m.g Eutrema salsugineum Thhalv10022660m.g I 0.000
Thhalv10024509m.g Eutrema salsugineum Thhalv10024509m.g I 0.000
Thhalv10024906m.g Eutrema salsugineum Thhalv10024906m.g I 0.000
Thhalv10027690m.g Eutrema salsugineum Thhalv10027690m.g I 0.000
PK13537.1 Cannabis sativa PK13537.1 I 0.000
PK14089.1 Cannabis sativa PK14089.1 I 0.000
PK16496.1 Cannabis sativa PK16496.1 I 0.000
PK25203.1 Cannabis sativa PK25203.1 I 0.000
chr1.CM0147.1110.nd Lotus japonicus chr1.CM0147.1110.nd I 0.000
chr1.CM0361.290.nc Lotus japonicus chr1.CM0361.290.nc I 0.000
chr2.CM0323.330.nc Lotus japonicus chr2.CM0323.330.nc I 0.000
chr4.CM0501.80.nd Lotus japonicus chr4.CM0501.80.nd I 0.000
PDK_20s1324881g001 Phoenix dactylifera PDK_20s1324881g001 I 0.000
PDK_20s1445341g001 Phoenix dactylifera PDK_20s1445341g001 I 0.000
PDK_20s1584091g001 Phoenix dactylifera PDK_20s1584091g001 I 0.000
PDK_20s1610891g002 Phoenix dactylifera PDK_20s1610891g002 I 0.000