ENSECAG00000020388 (Equus caballus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSECAG00000020388 T209174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOXD13
M00299_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_REF 		0.867 1.000
Hoxd13
M00394_2.00 		Mus musculus
NWTHRYDDN
NHHRYDAWN		 PBM
Berger et al.(2008)
Hoxd13_2356 		0.867 1.000
HOXD13
M03141_2.00 		Homo sapiens
DTTTTATKRS
SYMATAAAAH		 SELEX
Jolma et al.(2013)
HOXD13_1 		0.867 1.000
HOXD13
M03142_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Jolma et al.(2013)
HOXD13_2 		0.867 1.000
Hoxd13
M03247_2.00 		Mus musculus
DKTTTATTRS
SYAATAAAMH		 SELEX
Jolma et al.(2013)
Hoxd13_1 		0.867 1.000
Hoxd13
M03248_2.00 		Mus musculus
DDTTTAYKAGN
NCTMRTAAAHH		 SELEX
Jolma et al.(2013)
Hoxd13_2 		0.867 1.000
HOXD13
M05122_2.00 		Homo sapiens
GKTTTATKGSS
SSCMATAAAMC		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_1 		0.867 1.000
HOXD13
M05123_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_2 		0.867 1.000
HOXD13
M10689_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD13_Q6 		0.867 1.000
HOXD13
M05124_2.00 		Homo sapiens
DDTTTATTRBB
VVYAATAAAHH		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_1 		0.867 1.000
HOXD13
M05125_2.00 		Homo sapiens
VCTCGTAAAAH
DTTTTACGAGB		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_2 		0.867 1.000
HOXD13
M00295_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_N298S 		0.867 0.982
HOXD13
M00300_2.00 		Homo sapiens
WTTTATDR
YHATAAAW		 PBM
Barrera et al.(2016)
HOXD13_S316C 		0.867 0.982
HOXD13
M00293_2.00 		Homo sapiens
NTTWAYDDNN
NNHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_I297V 		0.866 0.982
HOXD13
M00298_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_R306W 		0.859 0.982
HOXD13
M00294_2.00 		Homo sapiens
THGTWAAW
WTTWACDA		 PBM
Barrera et al.(2016)
HOXD13_I322L 		0.849 0.982
hoxd13a
M02081_2.00 		Danio rerio
WTTTATDR
YHATAAAW		 PBM
Weirauch et al.(2014)
pTH6143 		0.848 0.807
Hoxa13
M00473_2.00 		Mus musculus
NTTWAYDRN
NYHRTWAAN		 PBM
Berger et al.(2008)
Hoxa13_3126 		0.834 0.895
HOXA13
M03098_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_1 		0.834 0.895
HOXA13
M03099_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_2 		0.834 0.895
HOXA13
M03100_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_3 		0.834 0.895
HOXA13
M03101_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_4 		0.834 0.895
HOXA13
M04977_2.00 		Homo sapiens
DTTTTATKGGB
VCCMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_1 		0.834 0.895
HOXA13
M04978_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_2 		0.834 0.895
HOXA13
M04981_2.00 		Homo sapiens
DTTTTATKRSN
NSYMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_1 		0.834 0.895
HOXA13
M04982_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_2 		0.834 0.895
HOXA13
M09134_2.00 		Homo sapiens
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_HUMAN.H11MO.0.C 		0.834 0.895
Hoxa13
M09202_2.00 		Mus musculus
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_MOUSE.H11MO.0.C 		0.834 0.895
HOXA13
M10653_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_01 		0.834 0.895
HOXA13
M10654_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_02 		0.834 0.895
HOXA13
M04979_2.00 		Homo sapiens
DTTTTATTRSN
NSYAATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_1 		0.834 0.895
HOXA13
M04980_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_2 		0.834 0.895
HOXA13
M04983_2.00 		Homo sapiens
DKTTTATTGBN
NVCAATAAAMH		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_1 		0.834 0.895
HOXA13
M04984_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_2 		0.834 0.895
Hoxc13
M00389_2.00 		Mus musculus
NTTWAYDRNN
NNYHRTWAAN		 PBM
Berger et al.(2008)
Hoxc13_3127 		0.834 0.860
HOXC13
M03129_2.00 		Homo sapiens
NTTTTATTRS
SYAATAAAAN		 SELEX
Jolma et al.(2013)
HOXC13_1 		0.834 0.860
HOXC13
M03130_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXC13_2 		0.834 0.860
HOXC13
M05072_2.00 		Homo sapiens
RKTTTATKGSN
NSCMATAAAMY		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_1 		0.834 0.860
HOXC13
M05073_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_2 		0.834 0.860
HOXC13
M10680_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXC13_Q2 		0.834 0.860
HOXC13
M05074_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_Methyl-HT-SELEX 		0.834 0.860
HOXB13
M02092_2.00 		Homo sapiens
NTTWAYDDNN
NNHHRTWAAN		 PBM
Weirauch et al.(2014)
pTH5808 		0.704 0.807
Hoxb13
M00505_2.00 		Mus musculus
NTTWAYDDNN
NNHHRTWAAN		 PBM
Berger et al.(2008)
Hoxb13_3479 		0.704 0.807
HOXB13
M03175_2.00 		Homo sapiens
DTTTTATKGG
CCMATAAAAH		 SELEX
Jolma et al.(2013)
HOXB13_1 		0.704 0.807
HOXB13
M03176_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Jolma et al.(2013)
HOXB13_2 		0.704 0.807
HOXB13
M05201_2.00 		Homo sapiens
DTTTTATKGGN
NCCMATAAAAH		 SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_1 		0.704 0.807
HOXB13
M05202_2.00 		Homo sapiens
NCTCGTAAAHH
DDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_2 		0.704 0.807
HOXB13
M09149_2.00 		Homo sapiens
TTTTATDRSN
NSYHATAAAA		 Misc
Kulakovskiy et al.(2013)
HXB13_HUMAN.H11MO.0.A 		0.704 0.807
HOXB13
M05203_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Yin et al.(2017)
HOXB13_eDBD_Methyl-HT-SELEX 		0.704 0.807
HOXD13
M00296_2.00 		Homo sapiens
GKATAAAH
DTTTATMC		 PBM
Barrera et al.(2016)
HOXD13_Q325K 		0.633 0.982
HOXD13
M00297_2.00 		Homo sapiens
NWTWRKNNNN
NNNNMYWAWN		 PBM
Barrera et al.(2016)
HOXD13_Q325R 		0.633 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000017825 Homeodomain 162 218

Links

Other Homeodomain family TFs
Other Equus caballus TFs

266 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
col-26 Neurospora crassa NCU07788 D 0.000
TRIATDRAFT_11573 Trichoderma atroviride TRIATDRAFT_11573 I 0.000
VDBG_09402 Verticillium albo atrum VDBG_09402 I 0.000
MYCTH_2301920 Myceliophthora thermophila MYCTH_2301920 I 0.000
NEUTE1DRAFT_59081 Neurospora tetrasperma NEUTE1DRAFT_59081 I 0.000
OCS_01944 Ophiocordyceps sinensis OCS_01944 I 0.000
OIDMADRAFT_45538 Oidiodendron maius OIDMADRAFT_45538 I 0.000
PFICI_10998 Pestalotiopsis fici PFICI_10998 I 0.000
PODANS_2_4060 Podospora anserina PODANS_2_4060 I 0.000
S40285_00097 Stachybotrys chlorohalonata S40285_00097 I 0.000
S40288_01569 Stachybotrys chartarum S40288_01569 I 0.000
SAPIO_CDS0393 Scedosporium apiospermum SAPIO_CDS0393 I 0.000
SMAC_08231 Sordaria macrospora SMAC_08231 I 0.000
THITE_2108095 Thielavia terrestris THITE_2108095 I 0.000
MGU_01655 Metarhizium guizhouense MGU_01655 I 0.000
TRIREDRAFT_52368 Trichoderma reesei TRIREDRAFT_52368 I 0.000
TRIVIDRAFT_156582 Trichoderma virens TRIVIDRAFT_156582 I 0.000
UCREL1_10245 Eutypa lata UCREL1_10245 I 0.000
UV8b_5300 Ustilaginoidea virens UV8b_5300 I 0.000
V499_05963 Pseudogymnoascus pannorum V499_05963 I 0.000
VDAG_04640 Verticillium dahliae VDAG_04640 I 0.000
VDBG_09402 Verticillium alfalfae VDBG_09402 I 0.000
VHEMI08540 Torrubiella hemipterigena VHEMI08540 I 0.000
X797_001512 Metarhizium robertsii X797_001512 I 0.000
estExt_Genewise1Plus.C_140234 Neurospora discreta estExt_Genewise1Plus.C_140234 I 0.000
estExt_Genewise1Plus.C_13371 Cryphonectria parasitica estExt_Genewise1Plus.C_13371 I 0.000
EV44_g6268 Erysiphe necator EV44_g6268 I 0.000
ACRE_067850 Acremonium chrysogenum ACRE_067850 I 0.000
BBA_09189 Beauveria bassiana BBA_09189 I 0.000
Bcin08g00160 Botrytis cinerea Bcin08g00160 I 0.000
BGHDH14_bgh05094 Blumeria graminis BGHDH14_bgh05094 I 0.000
CCM_09080 Cordyceps militaris CCM_09080 I 0.000
CFIO01_10198 Colletotrichum fioriniae CFIO01_10198 I 0.000
CH063_08735 Colletotrichum higginsianum CH063_08735 I 0.000
CHGG_07364 Chaetomium globosum CHGG_07364 I 0.000
CMQ_7699 Grosmannia clavigera CMQ_7699 I 0.000
CPUR_08028 Claviceps purpurea CPUR_08028 I 0.000
CSUB01_05898 Colletotrichum sublineola CSUB01_05898 I 0.000
CTHT_0068480 Chaetomium thermophilum CTHT_0068480 I 0.000
MGG_05343 Magnaporthe oryzae MGG_05343 I 0.000
F503_04220 Ophiostoma piceae uamh F503_04220 I 0.000
GGTG_06006 Gaeumannomyces graminis GGTG_06006 I 0.000
GLRG_01145 Colletotrichum graminicola GLRG_01145 I 0.000
GMDG_01905 Pseudogymnoascus destructans GMDG_01905 I 0.000
MAC_05572 Metarhizium acridum MAC_05572 I 0.000
MAJ_06898 Metarhizium majus MAJ_06898 I 0.000
MAM_04875 Metarhizium album MAM_04875 I 0.000
MANI_011912 Metarhizium anisopliae MANI_011912 I 0.000
MAPG_04263 Magnaporthe poae MAPG_04263 I 0.000
MBM_09456 Marssonina brunnea MBM_09456 I 0.000
MBR_05015 Metarhizium brunneum MBR_05015 I 0.000
S40288_10011 Stachybotrys chartarum S40288_10011 N 0.000