CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DLX1
(
Echinops telfairi
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSETEG00000017573
T209426_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.696
0.279
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.696
0.279
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.696
0.279
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.696
0.279
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.696
0.279
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.696
0.279
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.696
0.279
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.696
0.279
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.696
0.279
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.694
0.419
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.694
0.419
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.694
0.419
Dlx1
M00491_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Dlx1_1741
0.326
1.000
DLX1
M03166_2.00
Homo sapiens
NNTAATTDNN
NNHAATTANN
SELEX
Jolma et al.(2013)
DLX1_1
0.326
1.000
Dlx1
M03281_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Dlx1_1
0.326
1.000
DLX1
M05176_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX1_eDBD_HT-SELEX
0.326
1.000
DLX1
M05178_2.00
Homo sapiens
NTAATTRB
VYAATTAN
SELEX
Yin et al.(2017)
DLX1_FL_HT-SELEX
0.326
1.000
DLX1
M05177_2.00
Homo sapiens
NTAATTRB
VYAATTAN
SELEX
Yin et al.(2017)
DLX1_eDBD_Methyl-HT-SELEX
0.326
1.000
DLX1
M05179_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
DLX1_FL_Methyl-HT-SELEX
0.326
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000014270
Homeodomain
129
173
RKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQXX
Links
Other
Homeodomain
family TFs
Other
Echinops telfairi
TFs
1314 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RHTO_01077
Rhodosporidium toruloides
RHTO_01077
N
0.000
PAXRUDRAFT_33927
Paxillus rubicundulus
PAXRUDRAFT_33927
N
0.000
PHACADRAFT_254049
Phanerochaete carnosa
PHACADRAFT_254049
N
0.000
PILCRDRAFT_122351
Piloderma croceum
PILCRDRAFT_122351
N
0.000
PILCRDRAFT_33349
Piloderma croceum
PILCRDRAFT_33349
N
0.000
PISMIDRAFT_283095
Pisolithus microcarpus
PISMIDRAFT_283095
N
0.000
PLEOSDRAFT_1060467
Pleurotus ostreatus
PLEOSDRAFT_1060467
N
0.000
POSPLDRAFT_135062
Postia placenta
POSPLDRAFT_135062
N
0.000
POSPLDRAFT_47293
Postia placenta
POSPLDRAFT_47293
N
0.000
POSPLDRAFT_60615
Postia placenta
POSPLDRAFT_60615
N
0.000
PAXRUDRAFT_15625
Paxillus rubicundulus
PAXRUDRAFT_15625
N
0.000
SCLCIDRAFT_1225180
Scleroderma citrinum
SCLCIDRAFT_1225180
N
0.000
SERLA73DRAFT_176212
Serpula lacrymans
SERLA73DRAFT_176212
N
0.000
SERLA73DRAFT_66208
Serpula lacrymans
SERLA73DRAFT_66208
N
0.000
e_gw1.12.266.1
Mucor circinelloides
e_gw1.12.266.1
N
0.000
e_gw1.7.560.1
Sporobolomyces roseus
e_gw1.7.560.1
N
0.000
e_gww2.7.722.1
Phanerochaete chrysosporium
e_gww2.7.722.1
N
0.000
fgeneshPB_pg.11__148
Phycomyces blakesleeanus
fgeneshPB_pg.11__148
N
0.000
gw1.1.1202.1
Heterobasidion annosum
gw1.1.1202.1
N
0.000
GALMADRAFT_233958
Galerina marginata
GALMADRAFT_233958
N
0.000
BN946_scf185001.g47
Trametes cinnabarina
BN946_scf185001.g47
N
0.000
CERSUDRAFT_114830
Ceriporiopsis subvermispora
CERSUDRAFT_114830
N
0.000
CERSUDRAFT_115065
Ceriporiopsis subvermispora
CERSUDRAFT_115065
N
0.000
CY34DRAFT_31562
Suillus luteus
CY34DRAFT_31562
N
0.000
CY34DRAFT_809277
Suillus luteus
CY34DRAFT_809277
N
0.000
DACRYDRAFT_36073
Dacryopinax sp
DACRYDRAFT_36073
N
0.000
FOMPIDRAFT_1085863
Fomitopsis pinicola
FOMPIDRAFT_1085863
N
0.000
FOMPIDRAFT_1145789
Fomitopsis pinicola
FOMPIDRAFT_1145789
N
0.000
AGABI2DRAFT_197789
Agaricus bisporus
AGABI2DRAFT_197789
N
0.000
GALMADRAFT_246744
Galerina marginata
GALMADRAFT_246744
N
0.000
GYMLUDRAFT_174618
Gymnopus luxurians
GYMLUDRAFT_174618
N
0.000
HYDPIDRAFT_99864
Hydnomerulius pinastri
HYDPIDRAFT_99864
N
0.000
JAAARDRAFT_103126
Jaapia argillacea
JAAARDRAFT_103126
N
0.000
M378DRAFT_34186
Amanita muscaria
M378DRAFT_34186
N
0.000
M404DRAFT_998133
Pisolithus tinctorius
M404DRAFT_998133
N
0.000
M413DRAFT_237712
Hebeloma cylindrosporum
M413DRAFT_237712
N
0.000
MVLG_00837
Microbotryum violaceum
MVLG_00837
N
0.000