CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMICG00000002512
(
Microcebus murinus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMICG00000002512
T211592_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.617
0.448
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.617
0.448
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.617
0.448
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.617
0.448
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.617
0.448
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.617
0.448
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.617
0.448
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.617
0.448
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.617
0.448
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.605
0.345
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.605
0.345
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.605
0.345
LBX1
M02090_2.00
Homo sapiens
NTAAYTRG
CYARTTAN
PBM
Weirauch et al.(2014)
pTH6404
0.252
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000002289
Homeodomain
126
154
RKSRTAFTNHQIYELEKRFLYQKYLSPAD
Links
Other
Homeodomain
family TFs
Other
Microcebus murinus
TFs
988 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NKX3-1
Homo sapiens
ENSG00000167034
D
0.000
Nkx3-1
Mus musculus
ENSMUSG00000022061
D
0.000
CpipJ_CPIJ009086
Culex pipiens
CpipJ_CPIJ009086
I
0.649
ACEP22182
Atta cephalotes
ACEP22182
I
0.686
ACEP22767
Atta cephalotes
ACEP22767
I
0.649
CapteG41929
Capitella teleta
CapteG41929
I
0.686
CBN30161
Caenorhabditis brenneri
CBN30161
I
0.649
CBN30402
Caenorhabditis brenneri
CBN30402
I
0.649
CPIJ009086
Culex quinquefasciatus
CPIJ009086
I
0.649
ENSAMEG00000002866
Ailuropoda melanoleuca
ENSAMEG00000002866
I
0.000
ENSAMEG00000004941
Ailuropoda melanoleuca
ENSAMEG00000004941
I
0.690
ENSAPLG00000010700
Anas platyrhynchos
ENSAPLG00000010700
I
0.638
NKX3-1
Bos taurus
ENSBTAG00000001221
I
0.000
ENSCAFG00000009107
Canis familiaris
ENSCAFG00000009107
I
0.000
EMX2
Choloepus hoffmanni
ENSCHOG00000004674
I
0.649
ENSCHOG00000011132
Choloepus hoffmanni
ENSCHOG00000011132
I
0.000
NKX3-1
Callithrix jacchus
ENSCJAG00000020092
I
0.000
ENSCSAG00000016229
Chlorocebus sabaeus
ENSCSAG00000016229
I
0.000
emx3
Danio rerio
ENSDARG00000020417
I
0.649
NKX3-1
Dasypus novemcinctus
ENSDNOG00000044451
I
0.000
NKX3-1
Erinaceus europaeus
ENSEEUG00000001113
I
0.000
HLX
Echinops telfairi
ENSETEG00000003298
I
0.000
HOXC4
Echinops telfairi
ENSETEG00000017258
I
0.611
ENSFALG00000002206
Ficedula albicollis
ENSFALG00000002206
I
0.638
NKX3-1
Gorilla gorilla
ENSGGOG00000014369
I
0.000
ENSGGOG00000027271
Gorilla gorilla
ENSGGOG00000027271
I
0.638
ENSMEUG00000003167
Macropus eugenii
ENSMEUG00000003167
I
0.000
NKX3-1
Microcebus murinus
ENSMICG00000011189
I
0.000
NKX3-1
Macaca mulatta
ENSMMUG00000009796
I
0.000
NKX3-1
Monodelphis domestica
ENSMODG00000016789
I
0.000
ENSNLEG00000015968
Nomascus leucogenys
ENSNLEG00000015968
I
0.000
NKX3-1
Ornithorhynchus anatinus
ENSOANG00000008027
I
0.000
ENSOANG00000030226
Ornithorhynchus anatinus
ENSOANG00000030226
I
0.676
ENSOARG00000010071
Ovis aries
ENSOARG00000010071
I
0.000
NKX3-1
Oryctolagus cuniculus
ENSOCUG00000004294
I
0.000
NKX3-1
Otolemur garnettii
ENSOGAG00000001303
I
0.000
ENSOPRG00000009359
Ochotona princeps
ENSOPRG00000009359
I
0.638
ENSPANG00000004934
Papio anubis
ENSPANG00000004934
I
0.000
ENSPCAG00000016644
Procavia capensis
ENSPCAG00000016644
I
0.000
ENSPPYG00000018442
Pongo abelii
ENSPPYG00000018442
I
0.000
NKX3-1
Pan troglodytes
ENSPTRG00000020081
I
0.000
VAX2
Pteropus vampyrus
ENSPVAG00000002902
I
0.638
MNX1
Pteropus vampyrus
ENSPVAG00000006643
I
0.686
Nkx3-1
Rattus norvegicus
ENSRNOG00000015477
I
0.000
ENSSARG00000001895
Sorex araneus
ENSSARG00000001895
I
0.000
HLX
Sorex araneus
ENSSARG00000009476
I
0.000
ENSSHAG00000015475
Sarcophilus harrisii
ENSSHAG00000015475
I
0.000
ENSSHAG00000015712
Sarcophilus harrisii
ENSSHAG00000015712
I
0.616
ENSSSCG00000010671
Sus scrofa
ENSSSCG00000010671
I
0.616
ENSSSCG00000028216
Sus scrofa
ENSSSCG00000028216
I
0.000
ENSTBEG00000002319
Tupaia belangeri
ENSTBEG00000002319
I
0.000
emx3
Tetraodon nigroviridis
ENSTNIG00000012965
I
0.649
ENSTNIG00000018605
Tetraodon nigroviridis
ENSTNIG00000018605
I
0.000
emx1
Takifugu rubripes
ENSTRUG00000001305
I
0.649
emx1
Takifugu rubripes
ENSTRUG00000003603
I
0.649
ENSTRUG00000006182
Takifugu rubripes
ENSTRUG00000006182
I
0.616
MICALL2
Takifugu rubripes
ENSTRUG00000013527
I
0.000
nkx3.2
Takifugu rubripes
ENSTRUG00000014438
I
0.000
ENSTSYG00000007023
Tarsius syrichta
ENSTSYG00000007023
I
0.649
ENSTSYG00000007109
Tarsius syrichta
ENSTSYG00000007109
I
0.000
NKX3-1
Vicugna pacos
ENSVPAG00000004503
I
0.000
ENSXMAG00000003757
Xiphophorus maculatus
ENSXMAG00000003757
I
0.638
ENSXMAG00000020166
Xiphophorus maculatus
ENSXMAG00000020166
I
0.676
ISCW012144
Ixodes scapularis
ISCW012144
I
0.616
LotgiG56601
Lottia gigantea
LotgiG56601
I
0.650
MESCA002805
Megaselia scalaris
MESCA002805
I
0.686
MESCA003774
Megaselia scalaris
MESCA003774
I
0.681
RPRC010410
Rhodnius prolixus
RPRC010410
I
0.649
SINV25862
Solenopsis invicta
SINV25862
I
0.686
Aan_R009033
Calypte anna
Aan_R009033
I
0.638
Afo_R008451
Aptenodytes forsteri
Afo_R008451
I
0.676
Alligator_sinensis_CCG004474.1
Alligator sinensis
Alligator_sinensis_CCG004474.1
I
0.638
Alligator_sinensis_CCG010661.1
Alligator sinensis
Alligator_sinensis_CCG010661.1
I
0.718
Brh_R006136
Buceros rhinoceros
Brh_R006136
I
0.638
Cmyd_10004252
Chelonia mydas
Cmyd_10004252
I
0.686
Cmyd_10016952
Chelonia mydas
Cmyd_10016952
I
0.686
ENSBTAP00000001615-D1
Bos grunniens
ENSBTAP00000001615-D1
I
0.000
ENSBTAP00000006353-D1
Bos grunniens
ENSBTAP00000006353-D1
I
0.656
ENSMMUP00000035614
Macaca fascicularis
ENSMMUP00000035614
I
0.638
ENSP00000370253
Macaca fascicularis
ENSP00000370253
I
0.000
Ogr16578
Ophisaurus gracilis
Ogr16578
I
0.638
e_gw.5.534.1
Branchiostoma floridae
e_gw.5.534.1
I
0.000
e_gw.5.535.1
Branchiostoma floridae
e_gw.5.535.1
I
0.000
Minc06164
Meloidogyne incognita
Minc06164
I
0.681
Minc09570
Meloidogyne incognita
Minc09570
I
0.654
AALB002056
Anopheles albimanus
AALB002056
I
0.649
AALB004916
Anopheles albimanus
AALB004916
I
0.686
AALB007707
Anopheles albimanus
AALB007707
I
0.681
AATE014392
Anopheles atroparvus
AATE014392
I
0.686
ADIR008635
Anopheles dirus
ADIR008635
I
0.686
AFUN001618
Anopheles funestus
AFUN001618
I
0.649
AMEC018259
Anopheles melas
AMEC018259
I
0.686
AMEM013417
Anopheles merus
AMEM013417
I
0.686
ASIS013253
Anopheles sinensis
ASIS013253
I
0.686
BGLB001192
Biomphalaria glabrata
BGLB001192
I
0.649
ACAC_0001212901
Angiostrongylus cantonensis
ACAC_0001212901
I
0.637
ALUE_0000610701
Ascaris lumbricoides
ALUE_0000610701
I
0.649
ANCDUO_12194
Ancylostoma duodenale
ANCDUO_12194
I
0.654
ASU_12993
Ascaris suum
ASU_12993
I
0.621
DICVIV_05702
Dictyocaulus viviparus
DICVIV_05702
I
0.637
DILT_0001226501
Diphyllobothrium latum
DILT_0001226501
I
0.000
DME_0000147601
Dracunculus medinensis
DME_0000147601
I
0.637
GPLIN_001352400
Globodera pallida
GPLIN_001352400
I
0.651
Hba_05336
Heterorhabditis bacteriophora
Hba_05336
I
0.616
HDID_0000783701
Hymenolepis diminuta
HDID_0000783701
I
0.681
MhA1_Contig2487.frz3.gene2
Meloidogyne hapla
MhA1_Contig2487.frz3.gene2
I
0.641
nDi.2.2.2.g12576
Dirofilaria immitis
nDi.2.2.2.g12576
I
0.621
nOo.2.0.1.g11932
Onchocerca ochengi
nOo.2.0.1.g11932
I
0.649
nRc.2.0.1.g25699
Romanomermis culicivorax
nRc.2.0.1.g25699
I
0.636
PEQ_0000039001
Parascaris equorum
PEQ_0000039001
I
0.629
PEQ_0000891801
Parascaris equorum
PEQ_0000891801
I
0.616
PXEA_0002876601
Protopolystoma xenopodis
PXEA_0002876601
I
0.650
SBAD_0000661201
Soboliphyme baturini
SBAD_0000661201
I
0.676
SMUV_0000791901
Syphacia muris
SMUV_0000791901
I
0.649
SSLN_0001021301
Schistocephalus solidus
SSLN_0001021301
I
0.000
T265_13587
Opisthorchis viverrini
T265_13587
I
0.636
TELCIR_16193
Teladorsagia circumcincta
TELCIR_16193
I
0.637
TELCIR_24055
Teladorsagia circumcincta
TELCIR_24055
I
0.637
CpipJ_CPIJ016099
Culex pipiens
CpipJ_CPIJ016099
N
0.000
WUBG_08134
Wuchereria bancrofti
WUBG_08134
N
0.000
ACEP16435
Atta cephalotes
ACEP16435
N
0.000
BGIBMGA011355
Bombyx mori
BGIBMGA011355
N
0.000
CPIJ016099
Culex quinquefasciatus
CPIJ016099
N
0.000
ENSACAG00000002042
Anolis carolinensis
ENSACAG00000002042
N
0.000
ENSAPLG00000006374
Anas platyrhynchos
ENSAPLG00000006374
N
0.000
DBX1
Canis familiaris
ENSCAFG00000009813
N
0.000
ENSEEUG00000014300
Erinaceus europaeus
ENSEEUG00000014300
N
0.000
ENSFALG00000012045
Ficedula albicollis
ENSFALG00000012045
N
0.000
ENSGALG00000027554
Gallus gallus
ENSGALG00000027554
N
0.000
ENSGMOG00000002488
Gadus morhua
ENSGMOG00000002488
N
0.000
ENSOPRG00000015148
Ochotona princeps
ENSOPRG00000015148
N
0.000
ENSTBEG00000005783
Tupaia belangeri
ENSTBEG00000005783
N
0.000
ENSTGUG00000002708
Taeniopygia guttata
ENSTGUG00000002708
N
0.000
ENSTNIG00000016985
Tetraodon nigroviridis
ENSTNIG00000016985
N
0.000
ISCW011755
Ixodes scapularis
ISCW011755
N
0.000
L798_10069
Zootermopsis nevadensis
L798_10069
N
0.000
MCINX013655
Melitaea cinxia
MCINX013655
N
0.000
NEMVEDRAFT_v1g94003
Nematostella vectensis
NEMVEDRAFT_v1g94003
N
0.000
RPRC011993
Rhodnius prolixus
RPRC011993
N
0.000
SINV13310
Solenopsis invicta
SINV13310
N
0.000
Aan_R009659
Calypte anna
Aan_R009659
N
0.000
Ca_12504
Cicer arietinum
Ca_12504
N
0.000
Gfo_R010904
Geospiza fortis
Gfo_R010904
N
0.000
Ocbimv22038272m.g
Octopus bimaculoides
Ocbimv22038272m.g
N
0.000
CLEC012266
Cimex lectularius
CLEC012266
N
0.000
LCUP015731
Lucilia cuprina
LCUP015731
N
0.000
LDEC001875
Leptinotarsa decemlineata
LDEC001875
N
0.000
AALB004801
Anopheles albimanus
AALB004801
N
0.000
AARA005693
Anopheles arabiensis
AARA005693
N
0.000
ACUA018681
Anopheles culicifacies
ACUA018681
N
0.000
ADIR007401
Anopheles dirus
ADIR007401
N
0.000
AEPI004567
Anopheles epiroticus
AEPI004567
N
0.000
AFAF010529
Anopheles farauti
AFAF010529
N
0.000
AFUN006141
Anopheles funestus
AFUN006141
N
0.000
AFUN006142
Anopheles funestus
AFUN006142
N
0.000
AMEC014801
Anopheles melas
AMEC014801
N
0.000
AMIN011034
Anopheles minimus
AMIN011034
N
0.000
AQUA011153
Anopheles quadriannulatus
AQUA011153
N
0.000
ASTEI06400
Anopheles stephensi
ASTEI06400
N
0.000
BGLB001079
Biomphalaria glabrata
BGLB001079
N
0.000
PPAI003680
Phlebotomus papatasi
PPAI003680
N
0.000
csin111071
Clonorchis sinensis
csin111071
N
0.000
D915_01034
Fasciola hepatica
D915_01034
N
0.000
EEL_0000283301
Elaeophora elaphi
EEL_0000283301
N
0.000
HDID_0000158701
Hymenolepis diminuta
HDID_0000158701
N
0.000
L892_g2163
Steinernema scapterisci
L892_g2163
N
0.000
L893_g32186
Steinernema glaseri
L893_g32186
N
0.000
L893_g7450
Steinernema glaseri
L893_g7450
N
0.000
maker-nMf.1.1.scaf07538-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf07538-augustus-gene-0.6
N
0.000
SBAD_0000059701
Soboliphyme baturini
SBAD_0000059701
N
0.000
SCUD_0000356901
Schistosoma curassoni
SCUD_0000356901
N
0.000
SPER_0000200201
Spirometra erinaceieuropaei
SPER_0000200201
N
0.000
SSLN_0001900001
Schistocephalus solidus
SSLN_0001900001
N
0.000
T265_04102
Opisthorchis viverrini
T265_04102
N
0.000
TRE_0001634301
Trichobilharzia regenti
TRE_0001634301
N
0.000
TRE_0001854501
Trichobilharzia regenti
TRE_0001854501
N
0.000
TTAC_0001113501
Hydatigera taeniaeformis
TTAC_0001113501
N
0.000