CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSNLEG00000003031 *(Nomascus leucogenys)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSNLEG00000003031	T212649_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MEIS3 M03093_2.00	Homo sapiens	DTGACANN	NNTGTCAH	SELEX Jolma et al.(2013) MEIS3_1	0.866	0.973
Meis3 M00488_2.00	Mus musculus	NTGACANNN	NNNTGTCAN	PBM Berger et al.(2008) Mrg2_2302	0.867	1.000
MEIS3 M03094_2.00	Homo sapiens	TGACAGSTGTCA	TGACASCTGTCA	SELEX Jolma et al.(2013) MEIS3_2	0.866	0.973
Meis3 M03279_2.00	Mus musculus	NTGACAN	NTGTCAN	SELEX Jolma et al.(2013) Meis3_1	0.867	1.000
Meis3 M03280_2.00	Mus musculus	TGACAGSTGTCA	TGACASCTGTCA	SELEX Jolma et al.(2013) Meis3_2	0.867	1.000
MEIS3 M04951_2.00	Homo sapiens	TGWCABVTGWCA	TGWCABVTGWCA	SELEX Yin et al.(2017) MEIS3_eDBD_HT-SELEX	0.866	0.973
Meis1 M00407_2.00	Mus musculus	NTGACADNN	NNHTGTCAN	PBM Berger et al.(2008) Meis1_2335	0.835	0.982
MEIS3 M04952_2.00	Homo sapiens	YGWCABVTGWCR	YGWCABVTGWCR	SELEX Yin et al.(2017) MEIS3_eDBD_Methyl-HT-SELEX	0.866	0.973
Meis2 M00437_2.00	Mus musculus	NTGACANNN	NNNTGTCAN	PBM Berger et al.(2008) Mrg1_2246	0.835	0.982
Q5EVH4_OIKDI M02227_2.00	Oikopleura dioica	NTGACAKN	NMTGTCAN	PBM Weirauch et al.(2014) pTH6041	0.759	0.757
MEIS1 M03165_2.00	Homo sapiens	NTGACAN	NTGTCAN	SELEX Jolma et al.(2013) MEIS1_1	0.835	0.982
KNAT7 M01064_2.00	Arabidopsis thaliana	TGACRKST	ASMYGTCA	PBM Sullivan et al.(2014) pTH9798	0.667	0.514
KNAT4 M01238_2.00	Arabidopsis thaliana	NNGACNNNN	NNNNGTCNN	PBM Lambert et al.(2019) pTH9968	0.663	0.568
MEIS2 M03147_2.00	Homo sapiens	WTGACAGSTGTCAM	KTGACASCTGTCAW	SELEX Jolma et al.(2013) MEIS2_1	0.835	0.982
KNAT3 M02051_2.00	Arabidopsis thaliana	NNNGACVBNN	NNVBGTCNNN	PBM Weirauch et al.(2014) pTH7600	0.663	0.568
MEIS2 M03148_2.00	Homo sapiens	DTGACAGS	SCTGTCAH	SELEX Jolma et al.(2013) MEIS2_2	0.835	0.982
HOS66 M02156_2.00	Oryza sativa	NNNNDHNN	NNDHNNNN	PBM Weirauch et al.(2014) pTH8332	0.628	0.514
Meis2 M03261_2.00	Mus musculus	NTGACAN	NTGTCAN	SELEX Jolma et al.(2013) Meis2_1	0.835	0.982
Meis2 M03262_2.00	Mus musculus	TGACAGSTGTCA	TGACASCTGTCA	SELEX Jolma et al.(2013) Meis2_2	0.835	0.982
MEIS2 M02740_2.00	Homo sapiens	TGACASSTGTC	GACASSTGTCA	SELEX Jolma et al.(2010) MEIS2_dimer	0.835	0.982
MEIS2 M02741_2.00	Homo sapiens	GGACAKNT	ANMTGTCC	SELEX Jolma et al.(2010) MEIS2_monomer	0.835	0.982
MEIS2 M05138_2.00	Homo sapiens	TGACASSTGTCA	TGACASSTGTCA	SELEX Yin et al.(2017) MEIS2_eDBD_HT-SELEX	0.835	0.982
MEIS2 M05140_2.00	Homo sapiens	TGACASSTGTCA	TGACASSTGTCA	SELEX Yin et al.(2017) MEIS2_FL_HT-SELEX	0.835	0.982
MEIS1 M09148_2.00	Homo sapiens	NTGATTDATDDB	VHHATHAATCAN	Misc Kulakovskiy et al.(2013) MEIS1_HUMAN.H11MO.0.A	0.835	0.982
MEIS2 M09143_2.00	Homo sapiens	HTGACAGBTKTBM	KVAMAVCTGTCAD	Misc Kulakovskiy et al.(2013) MEIS2_HUMAN.H11MO.0.B	0.835	0.982
Meis1 M09178_2.00	Mus musculus	NTGATTDATDDB	VHHATHAATCAN	Misc Kulakovskiy et al.(2013) MEIS1_MOUSE.H11MO.0.A	0.835	0.982
Meis2 M09189_2.00	Mus musculus	HTGACAGBTKTBM	KVAMAVCTGTCAD	Misc Kulakovskiy et al.(2013) MEIS2_MOUSE.H11MO.0.B	0.835	0.982
Meis1 M09568_2.00	Mus musculus	VBTGWCASNN	NNSTGWCAVB	Misc Heinz et al.(2010) MastCells-Meis1_GSE48085	0.835	0.982
MEIS1 M10709_2.00	Homo sapiens	NHNTGACAGNDN	NHNCTGTCANDN	Transfac Matys et al.(2006) V$MEIS1_01	0.835	0.982
MEIS1 M10710_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MEIS1_06	0.835	0.982
MEIS2 M05139_2.00	Homo sapiens	YGACASSYGHCR	YGDCRSSTGTCR	SELEX Yin et al.(2017) MEIS2_eDBD_Methyl-HT-SELEX	0.835	0.982
MEIS2 M05141_2.00	Homo sapiens	TGACASSTGTCA	TGACASSTGTCA	SELEX Yin et al.(2017) MEIS2_FL_Methyl-HT-SELEX	0.835	0.982
hth M06490_2.00	Drosophila melanogaster	TGACAK	MTGTCA	B1H Mathelier et al.(2014) MA0227.1	0.835	0.945
hth M06252_2.00	Drosophila melanogaster	TGTCA	TGACA	B1H Zhu et al.(2011) Hth_Cell_FBgn0001235	0.835	0.945
hth M06253_2.00	Drosophila melanogaster	NNTGACAD	HTGTCANN	B1H Zhu et al.(2011) hth_SOLEXA_2_FBgn0001235	0.835	0.945
hth M06254_2.00	Drosophila melanogaster	NTGACA	TGTCAN	B1H Zhu et al.(2011) Hth_SOLEXA_FBgn0001235	0.835	0.945
unc-62 M02185_2.00	Caenorhabditis elegans	NHDAHANNN	NNNTDTHDN	PBM Weirauch et al.(2014) pTH5781	0.778	0.818
Pknox1 M00399_2.00	Mus musculus	HGACRNNN	NNNYGTCD	PBM Berger et al.(2008) Pknox1_2364	0.751	0.727
Pknox2 M00468_2.00	Mus musculus	NNNGACRNNN	NNNYGTCNNN	PBM Berger et al.(2008) Pknox2_3077	0.751	0.727
PKNOX1 M03178_2.00	Homo sapiens	TGACAGSTGTCA	TGACASCTGTCA	SELEX Jolma et al.(2013) PKNOX1_1	0.751	0.727
PKNOX2 M03195_2.00	Homo sapiens	TGACAGSTGTCA	TGACASCTGTCA	SELEX Jolma et al.(2013) PKNOX2_1	0.751	0.727
Pknox2 M03270_2.00	Mus musculus	TGACAGSTGTCA	TGACASCTGTCA	SELEX Jolma et al.(2013) Pknox2_1	0.751	0.727
PKNOX1 M05206_2.00	Homo sapiens	TGACASSTGTCA	TGACASSTGTCA	SELEX Yin et al.(2017) PKNOX1_eDBD_HT-SELEX	0.751	0.727
PKNOX1 M05208_2.00	Homo sapiens	TGACAGCTGTCA	TGACAGCTGTCA	SELEX Yin et al.(2017) PKNOX1_FL_HT-SELEX	0.751	0.727
PKNOX2 M05246_2.00	Homo sapiens	TGACABVTGTCA	TGACABVTGTCA	SELEX Yin et al.(2017) PKNOX2_eDBD_HT-SELEX	0.751	0.727
PKNOX1 M09150_2.00	Homo sapiens	TGABTGRCRGV	BCYGYCAVTCA	Misc Kulakovskiy et al.(2013) PKNX1_HUMAN.H11MO.0.B	0.751	0.727
Pknox1 M09175_2.00	Mus musculus	TGABTGRCRGV	BCYGYCAVTCA	Misc Kulakovskiy et al.(2013) PKNX1_MOUSE.H11MO.0.A	0.751	0.727
PKNOX1 M10712_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PREP1_Q3	0.751	0.727
PKNOX1 M05207_2.00	Homo sapiens	YGWCASSTGWCR	YGWCASSTGWCR	SELEX Yin et al.(2017) PKNOX1_eDBD_Methyl-HT-SELEX	0.751	0.727
PKNOX1 M05209_2.00	Homo sapiens	TGACABVTGTCA	TGACABVTGTCA	SELEX Yin et al.(2017) PKNOX1_FL_Methyl-HT-SELEX	0.751	0.727
PKNOX2 M05247_2.00	Homo sapiens	TGACASSTGTCA	TGACASSTGTCA	SELEX Yin et al.(2017) PKNOX2_eDBD_Methyl-HT-SELEX	0.751	0.727
achi M03860_2.00	Drosophila melanogaster	TGACAD	HTGTCA	SELEX Nitta et al.(2015) achi_1	0.657	0.527
achi M03861_2.00	Drosophila melanogaster	TGACAGMTGTCA	TGACAKCTGTCA	SELEX Nitta et al.(2015) achi_2	0.657	0.527
achi M03862_2.00	Drosophila melanogaster	TGACAGNNNNNNYGTCA	TGACRNNNNNNCTGTCA	SELEX Nitta et al.(2015) achi_3	0.657	0.527
vis M03859_2.00	Drosophila melanogaster	TGACAS	STGTCA	SELEX Nitta et al.(2015) vis_1	0.657	0.527
vis M06534_2.00	Drosophila melanogaster	TGACAB	BTGTCA	B1H Mathelier et al.(2014) MA0252.1	0.657	0.527
achi M06535_2.00	Drosophila melanogaster	TGACAG	CTGTCA	B1H Mathelier et al.(2014) MA0207.1	0.657	0.527
achi M06345_2.00	Drosophila melanogaster	TGTCADW	WHTGACA	B1H Zhu et al.(2011) Achi_Cell_FBgn0033749	0.657	0.527
achi M06346_2.00	Drosophila melanogaster	HTGACA	TGTCAD	B1H Zhu et al.(2011) Achi_SOLEXA_FBgn0033749	0.657	0.527
vis M06343_2.00	Drosophila melanogaster	TGTCA	TGACA	B1H Zhu et al.(2011) Vis_Cell_FBgn0033748	0.657	0.527
vis M06344_2.00	Drosophila melanogaster	TGTCAD	HTGACA	B1H Zhu et al.(2011) Vis_SOLEXA_FBgn0033748	0.657	0.527
Tgif2 M00521_2.00	Mus musculus	NNTGACANNN	NNNTGTCANN	PBM Berger et al.(2008) Tgif2_3451	0.657	0.509
TGIF2 M03123_2.00	Homo sapiens	TGACAGSTGTCA	TGACASCTGTCA	SELEX Jolma et al.(2013) TGIF2_1	0.657	0.509
TGIF2 M05032_2.00	Homo sapiens	TGACABVTGTCA	TGACABVTGTCA	SELEX Yin et al.(2017) TGIF2_eDBD_HT-SELEX	0.657	0.509
TGIF2 M05034_2.00	Homo sapiens	DTGACANN	NNTGTCAH	SELEX Yin et al.(2017) TGIF2_FL_HT-SELEX	0.657	0.509
TGIF2 M05033_2.00	Homo sapiens	TGWCABVTGWCA	TGWCABVTGWCA	SELEX Yin et al.(2017) TGIF2_eDBD_Methyl-HT-SELEX	0.657	0.509
TGIF2 M05035_2.00	Homo sapiens	DTGACANN	NNTGTCAH	SELEX Yin et al.(2017) TGIF2_FL_Methyl-HT-SELEX	0.657	0.509
Tgif1 M00500_2.00	Mus musculus	NNTGACANNN	NNNTGTCANN	PBM Berger et al.(2008) Tgif1_2342	0.624	0.527
TGIF1 M03223_2.00	Homo sapiens	TGACAGCTGTCA	TGACAGCTGTCA	SELEX Jolma et al.(2013) TGIF1_1	0.624	0.527
TGIF1 M05317_2.00	Homo sapiens	TGACAGSTGTCA	TGACASCTGTCA	SELEX Yin et al.(2017) TGIF1_eDBD_HT-SELEX	0.624	0.527
TGIF1 M09159_2.00	Homo sapiens	TGACAGS	SCTGTCA	Misc Kulakovskiy et al.(2013) TGIF1_HUMAN.H11MO.0.A	0.624	0.527
Tgif1 M09211_2.00	Mus musculus	TGACAGBNV	BNVCTGTCA	Misc Kulakovskiy et al.(2013) TGIF1_MOUSE.H11MO.0.A	0.624	0.527
TGIF1 M10740_2.00	Homo sapiens	WHNTGACARST	ASYTGTCANDW	Transfac Matys et al.(2006) V$TGIF_01	0.624	0.527
TGIF1 M05318_2.00	Homo sapiens	TGACAKVTGTCA	TGACABMTGTCA	SELEX Yin et al.(2017) TGIF1_eDBD_Methyl-HT-SELEX	0.624	0.527
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSNLEP00000003713	Homeodomain	278	314	WPQHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI
ENSNLEP00000003722	Homeodomain	204	261	NKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRI

Links
Other Homeodomain family TFs
Other *Nomascus leucogenys* TFs

1968 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ADAC001468	Anopheles darlingi	ADAC001468	I	0.000
ADAC008104	Anopheles darlingi	ADAC008104	I	0.000
CGI_10016653	Crassostrea gigas	CGI_10016653	I	0.000
EFV55592	Trichinella spiralis	EFV55592	I	0.000
EFV57629	Trichinella spiralis	EFV57629	I	0.000
ENSACAG00000002147	Anolis carolinensis	ENSACAG00000002147	I	0.000
ENSAMEG00000004942	Ailuropoda melanoleuca	ENSAMEG00000004942	I	0.000
DLX4	Bos taurus	ENSBTAG00000007353	I	0.000
DLX3	Bos taurus	ENSBTAG00000017409	I	0.000
DBX1	Callithrix jacchus	ENSCJAG00000006734	I	0.000
NOBOX	Callithrix jacchus	ENSCJAG00000009917	I	0.000
ENSCSAG00000007090	Chlorocebus sabaeus	ENSCSAG00000007090	I	0.000
NOBOX	Equus caballus	ENSECAG00000003123	I	0.000
NOBOX	Felis catus	ENSFCAG00000004352	I	0.000
NOBOX	Gorilla gorilla	ENSGGOG00000022185	I	0.000
NOBOX	Myotis lucifugus	ENSMLUG00000004209	I	0.000
DLX4	Myotis lucifugus	ENSMLUG00000007268	I	0.000
NOBOX	Macaca mulatta	ENSMMUG00000020609	I	0.000
ENSMPUG00000007079	Mustela putorius furo	ENSMPUG00000007079	I	0.000
ENSNLEG00000003406	Nomascus leucogenys	ENSNLEG00000003406	I	0.000
ENSOARG00000005572	Ovis aries	ENSOARG00000005572	I	0.000
NOBOX	Oryctolagus cuniculus	ENSOCUG00000001027	I	0.000
DLX4	Oryctolagus cuniculus	ENSOCUG00000022067	I	0.000
NOBOX	Otolemur garnettii	ENSOGAG00000010413	I	0.000
ENSPANG00000018829	Papio anubis	ENSPANG00000018829	I	0.000
meox1	Takifugu rubripes	ENSTRUG00000005193	I	0.000
drgx	Takifugu rubripes	ENSTRUG00000013446	I	0.000
ENSTSYG00000000516	Tarsius syrichta	ENSTSYG00000000516	I	0.000
ENSTSYG00000014450	Tarsius syrichta	ENSTSYG00000014450	I	0.000
GF12207	Drosophila ananassae	FBgn0089246	I	0.000
GF13343	Drosophila ananassae	FBgn0090375	I	0.000
GK22877	Drosophila willistoni	FBgn0224839	I	0.000
HelroG173001	Helobdella robusta	HelroG173001	I	0.000
HMEL006244	Heliconius melpomene	HMEL006244	I	0.000
L798_06393	Zootermopsis nevadensis	L798_06393	I	0.000
MCINX008871	Melitaea cinxia	MCINX008871	I	0.000
SINV13346	Solenopsis invicta	SINV13346	I	0.000
SPU_004366	Strongylocentrotus purpuratus	SPU_004366	I	0.000
TC000483	Tribolium castaneum	TC000483	I	0.000
YQE_10100	Dendroctonus ponderosae	YQE_10100	I	0.000
Aan_R011917	Calypte anna	Aan_R011917	I	0.000
Cflo_04174--XP_001120833.1_APIME	Camponotus floridanus	Cflo_04174--XP_001120833.1_APIME	I	0.000
Cmyd_10001740	Chelonia mydas	Cmyd_10001740	I	0.000
Cmyd_10012400	Chelonia mydas	Cmyd_10012400	I	0.000
ENSBTAP00000009672-D1	Bos grunniens	ENSBTAP00000009672-D1	I	0.000
ENSMMUP00000027138	Macaca fascicularis	ENSMMUP00000027138	I	0.000
ENSP00000419457-D1	Bos grunniens	ENSP00000419457-D1	I	0.000
Myotis_brandtii_NOBOX_10026198	Myotis brandtii	Myotis_brandtii_NOBOX_10026198	I	0.000
Ogr03859	Ophisaurus gracilis	Ogr03859	I	0.000
Ogr09065	Ophisaurus gracilis	Ogr09065	I	0.000
Pvit_13361	Pogona vitticeps	Pvit_13361	I	0.000
CLEC007171	Cimex lectularius	CLEC007171	I	0.000
LDEC008146	Leptinotarsa decemlineata	LDEC008146	I	0.000
SNAPOd2T00016706001	Oikopleura dioica	SNAPOd2T00016706001	I	0.000
ACUA004306	Anopheles culicifacies	ACUA004306	I	0.000
BGLB004491	Biomphalaria glabrata	BGLB004491	I	0.000
BGLB009341	Biomphalaria glabrata	BGLB009341	I	0.000
BGLB013824	Biomphalaria glabrata	BGLB013824	I	0.000
ALUE_0000848601	Ascaris lumbricoides	ALUE_0000848601	I	0.000
ALUE_0001497801	Ascaris lumbricoides	ALUE_0001497801	I	0.000
ASIM_0001230001	Anisakis simplex	ASIM_0001230001	I	0.000
D917_01051	Trichinella nativa	D917_01051	I	0.000
DICVIV_02647	Dictyocaulus viviparus	DICVIV_02647	I	0.000
EVEC_0000357701	Enterobius vermicularis	EVEC_0000357701	I	0.000
HPLM_0000971301	Haemonchus placei	HPLM_0000971301	I	0.000
HPLM_0001894101	Haemonchus placei	HPLM_0001894101	I	0.000
L596_g8967	Steinernema carpocapsae	L596_g8967	I	0.000
L892_g24303	Steinernema scapterisci	L892_g24303	I	0.000
MCOS_0000004601	Mesocestoides corti	MCOS_0000004601	I	0.000
NBR_0000705501	Nippostrongylus brasiliensis	NBR_0000705501	I	0.000
NECAME_16530	Necator americanus	NECAME_16530	I	0.000
nLs.2.1.2.g05836	Litomosoides sigmodontis	nLs.2.1.2.g05836	I	0.000
nRc.2.0.1.g34428	Romanomermis culicivorax	nRc.2.0.1.g34428	I	0.000
SSLN_0001460801	Schistocephalus solidus	SSLN_0001460801	I	0.000
T265_00628	Opisthorchis viverrini	T265_00628	I	0.000
T265_02852	Opisthorchis viverrini	T265_02852	I	0.000
T265_14002	Opisthorchis viverrini	T265_14002	I	0.000
TCNE_0001081001	Toxocara canis	TCNE_0001081001	I	0.000
TELCIR_07728	Teladorsagia circumcincta	TELCIR_07728	I	0.000
TTAC_0000027101	Hydatigera taeniaeformis	TTAC_0000027101	I	0.000
TTRE_0000072001	Trichuris trichiura	TTRE_0000072001	I	0.000
ENSAMEG00000004660	Ailuropoda melanoleuca	ENSAMEG00000004660	N	0.000
Dbx1	Dipodomys ordii	ENSDORG00000009286	N	0.000
DBX1	Echinops telfairi	ENSETEG00000017576	N	0.000
DBX1	Gorilla gorilla	ENSGGOG00000014848	N	0.000
DBX1	Microcebus murinus	ENSMICG00000017111	N	0.000
ENSNLEG00000017811	Nomascus leucogenys	ENSNLEG00000017811	N	0.000
DBX1	Ochotona princeps	ENSOPRG00000012954	N	0.000
DBX1	Procavia capensis	ENSPCAG00000004905	N	0.000
ENSPPYG00000003422	Pongo abelii	ENSPPYG00000003422	N	0.000
DBX1	Pan troglodytes	ENSPTRG00000003437	N	0.000
DBX1	Tursiops truncatus	ENSTTRG00000000318	N	0.000
LACBIDRAFT_321078	Laccaria bicolor	LACBIDRAFT_321078	N	0.000
Ogr00185	Ophisaurus gracilis	Ogr00185	N	0.000
ASTEI06918	Anopheles stephensi	ASTEI06918	N	0.000
ANCCEY_04248	Ancylostoma ceylanicum	ANCCEY_04248	N	0.000
DICVIV_04104	Dictyocaulus viviparus	DICVIV_04104	N	0.000
EVEC_0001149001	Enterobius vermicularis	EVEC_0001149001	N	0.000
HDID_0000333701	Hymenolepis diminuta	HDID_0000333701	N	0.000
MCOS_0000655901	Mesocestoides corti	MCOS_0000655901	N	0.000
TTAC_0001021101	Hydatigera taeniaeformis	TTAC_0001021101	N	0.000

ENSNLEG00000003031 (Nomascus leucogenys) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1968 Related TFs

ENSNLEG00000003031 **(Nomascus leucogenys)
Homeodomain**