CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSONIG00000002806
(
Oreochromis niloticus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSONIG00000002806
T213474_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Irx2
M00386_2.00
Mus musculus
NNDACAHNN
NNDTGTHNN
PBM
Berger et al.(2008)
Irx2_0900
0.867
1.000
Irx5
M00455_2.00
Mus musculus
NNNDACAHN
NDTGTHNNN
PBM
Berger et al.(2008)
Irx5_2385
0.867
1.000
IRX2
M03212_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX2_1
0.867
1.000
IRX5
M03222_2.00
Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN
SELEX
Jolma et al.(2013)
IRX5_1
0.867
1.000
IRX5
M05315_2.00
Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN
SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX
0.867
1.000
IRX5
M05316_2.00
Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW
SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX
0.867
1.000
ara
M06518_2.00
Drosophila melanogaster
WWACA
TGTWW
B1H
Mathelier et al.(2014)
MA0210.1
0.815
0.930
ara
M06313_2.00
Drosophila melanogaster
TGTWWWNN
NNWWWACA
B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904
0.815
0.930
ara
M06314_2.00
Drosophila melanogaster
DWWACA
TGTWWH
B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904
0.815
0.930
caup
M06519_2.00
Drosophila melanogaster
WAACA
TGTTW
B1H
Mathelier et al.(2014)
MA0217.1
0.806
0.877
caup
M06315_2.00
Drosophila melanogaster
HWDWAACA
TGTTWHWD
B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919
0.806
0.877
caup
M06316_2.00
Drosophila melanogaster
NDDACA
TGTHHN
B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919
0.806
0.877
Irx4
M00416_2.00
Mus musculus
NNNDAMAH
DTKTHNNN
PBM
Berger et al.(2008)
Irx4_2242
0.780
0.877
Irx6
M00456_2.00
Mus musculus
NNDAHWN
NWDTHNN
PBM
Berger et al.(2008)
Irx6_2623
0.780
0.860
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSONIP00000003518
Homeodomain
112
171
PAYRKNATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKK
Links
Other
Homeodomain
family TFs
Other
Oreochromis niloticus
TFs
387 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYT1L
Macaca mulatta
ENSMMUG00000009310
I
MYT1L
Homo sapiens
ENSG00000186487
I
L3MBTL1
Otolemur garnettii
ENSOGAG00000014470
N
ENSOARG00000003176
Ovis aries
ENSOARG00000003176
N
ENSONIG00000001923
Oreochromis niloticus
ENSONIG00000001923
N
L3MBTL1
Ochotona princeps
ENSOPRG00000002367
N
ENSORLG00000003513
Oryzias latipes
ENSORLG00000003513
N
ENSPANG00000026135
Papio anubis
ENSPANG00000026135
N
L3MBTL1
Procavia capensis
ENSPCAG00000013248
N
ENSPFOG00000022630
Poecilia formosa
ENSPFOG00000022630
N
ENSPSIG00000016444
Pelodiscus sinensis
ENSPSIG00000016444
N
L3MBTL1
Pan troglodytes
ENSPTRG00000013507
N
L3MBTL1
Pteropus vampyrus
ENSPVAG00000015234
N
L3mbtl1
Rattus norvegicus
ENSRNOG00000007044
N
ENSSSCG00000007365
Sus scrofa
ENSSSCG00000007365
N
ENSSTOG00000011672
Ictidomys tridecemlineatus
ENSSTOG00000011672
N
ENSTNIG00000012014
Tetraodon nigroviridis
ENSTNIG00000012014
N
ENSTSYG00000014180
Tarsius syrichta
ENSTSYG00000014180
N
ENSXMAG00000019188
Xiphophorus maculatus
ENSXMAG00000019188
N
ENSP00000362227
Macaca fascicularis
ENSP00000362227
N
Myotis_brandtii_L3MBTL1_10025184
Myotis brandtii
Myotis_brandtii_L3MBTL1_10025184
N
Ogr13959
Ophisaurus gracilis
Ogr13959
N
estExt_fgenesh2_pg.C_5980016
Branchiostoma floridae
estExt_fgenesh2_pg.C_5980016
N
Ocbimv22028662m.g
Octopus bimaculoides
Ocbimv22028662m.g
N
l3mbtl1
Xenopus tropicalis
XB-GENE-949999
N
AMEM007577
Anopheles merus
AMEM007577
N
SVUK_0001589601
Strongylus vulgaris
SVUK_0001589601
N
TsM_000155300
Taenia solium
TsM_000155300
N
L3MBTL1
Homo sapiens
ENSG00000185513
N
ENSAMEG00000003728
Ailuropoda melanoleuca
ENSAMEG00000003728
N
ENSAMXG00000008822
Astyanax mexicanus
ENSAMXG00000008822
N
L3MBTL1
Canis familiaris
ENSCAFG00000009291
N
L3MBTL1
Choloepus hoffmanni
ENSCHOG00000005052
N
L3MBTL1
Callithrix jacchus
ENSCJAG00000003964
N
MYT1L
Callithrix jacchus
ENSCJAG00000007286
N
ENSCSAG00000014035
Chlorocebus sabaeus
ENSCSAG00000014035
N
l3mbtl1a
Danio rerio
ENSDARG00000014828
N
L3mbtl1
Dipodomys ordii
ENSDORG00000002707
N
L3MBTL1
Equus caballus
ENSECAG00000008175
N
L3MBTL1
Erinaceus europaeus
ENSEEUG00000006232
N
ENSETEG00000013916
Echinops telfairi
ENSETEG00000013916
N
L3MBTL1
Oryctolagus cuniculus
ENSOCUG00000006662
N
ENSGACG00000006074
Gasterosteus aculeatus
ENSGACG00000006074
N
L3MBTL1
Gorilla gorilla
ENSGGOG00000034980
N
ENSGMOG00000006059
Gadus morhua
ENSGMOG00000006059
N
L3MBTL1
Microcebus murinus
ENSMICG00000015115
N
ENSMLUG00000016624
Myotis lucifugus
ENSMLUG00000016624
N
L3MBTL1
Monodelphis domestica
ENSMODG00000003647
N
ENSMPUG00000017691
Mustela putorius furo
ENSMPUG00000017691
N
L3mbtl1
Mus musculus
ENSMUSG00000035576
N
ENSNLEG00000006529
Nomascus leucogenys
ENSNLEG00000006529
N
L3MBTL1
Ornithorhynchus anatinus
ENSOANG00000014344
N
L3MBTL1
Anolis carolinensis
ENSACAG00000002143
N