irx5a (Oryzias latipes)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSORLG00000013711 T213947_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000017199 Homeodomain 112 171

Links

Other Homeodomain family TFs
Other Oryzias latipes TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANIA_00951 Aspergillus nidulans CADANIAG00001701 D
CIMG_13671 Coccidioides immitis CIMG_13671 I
MCYG_00012 Microsporum canis MCYG_00012 I
SNOG_02426 Stagonospora nodorum SNOG_02426 I
VDBG_05782 Verticillium albo atrum VDBG_05782 I
A1O1_04210 Capronia coronata A1O1_04210 I
A1O3_01208 Capronia epimyces A1O3_01208 I
A1O5_10470 Cladophialophora psammophila A1O5_10470 I
A1O7_02237 Cladophialophora yegresii A1O7_02237 I
A1O9_06736 Exophiala aquamarina A1O9_06736 I
ACRE_005470 Acremonium chrysogenum ACRE_005470 I
AOL_s00097g585 Arthrobotrys oligospora AOL_s00097g585 I
ARB_02172 Arthroderma benhamiae ARB_02172 I
AUEXF2481DRAFT_6481 Aureobasidium subglaciale AUEXF2481DRAFT_6481 I
Bcin03g00750 Botrytis cinerea Bcin03g00750 I
BDDG_03512 Blastomyces dermatitidis BDDG_03512 I
BGHDH14_bgh02790 Blumeria graminis BGHDH14_bgh02790 I
ACLA_019130 Aspergillus clavatus CADACLAG00002921 I
CADAFLAG00001090 Aspergillus flavus CADAFLAG00001090 I
AFUA_1G16460 Aspergillus fumigatus CADAFUAG00007656 I
CADANGAG00001076 Aspergillus niger CADANGAG00001076 I
ATEG_05161 Aspergillus terreus CADATEAG00004745 I
NFIA_008980 Neosartorya fischeri CADNFIAG00001347 I
CFIO01_07721 Colletotrichum fioriniae CFIO01_07721 I
CGGC5_4259 Colletotrichum gloeosporioides CGGC5_4259 I
CMQ_6538 Grosmannia clavigera CMQ_6538 I
Cob_11342 Colletotrichum orbiculare Cob_11342 I
COCC4DRAFT_52892 Bipolaris maydis COCC4DRAFT_52892 I
COCCADRAFT_202 Bipolaris zeicola COCCADRAFT_202 I
COCMIDRAFT_22848 Bipolaris oryzae COCMIDRAFT_22848 I
COCSADRAFT_34697 Bipolaris sorokiniana COCSADRAFT_34697 I
COCVIDRAFT_24689 Bipolaris victoriae COCVIDRAFT_24689 I
CPC735_010880 Coccidioides posadasii CPC735_010880 I
CPUR_06646 Claviceps purpurea CPUR_06646 I
CSUB01_10111 Colletotrichum sublineola CSUB01_10111 I
EURHEDRAFT_512193 Aspergillus ruber EURHEDRAFT_512193 I
EV44_g5365 Erysiphe necator EV44_g5365 I
F503_00378 Ophiostoma piceae uamh F503_00378 I
FFUJ_01766 Fusarium fujikuroi FFUJ_01766 I
FGRRES_01555 Fusarium graminearum FGRRES_01555 I
FOXG_11153 Fusarium oxysporum FOXG_11153 I
FPSE_00779 Fusarium pseudograminearum FPSE_00779 I
FVEG_09636 Fusarium verticillioides FVEG_09636 I
G647_08748 Cladophialophora carrionii G647_08748 I
GGTG_06418 Gaeumannomyces graminis GGTG_06418 I
GLRG_10296 Colletotrichum graminicola GLRG_10296 I
GMDG_00083 Pseudogymnoascus destructans GMDG_00083 I
GSTUM_00008508001 Tuber melanosporum GSTUM_00008508001 I
H072_2778 Dactylellina haptotyla H072_2778 I
H101_07555 Trichophyton interdigitale H101_07555 I
H102_00527 Trichophyton rubrum H102_00527 I
H105_00515 Trichophyton soudanense H105_00515 I
HCBG_01276 Histoplasma capsulatum HCBG_01276 I
HMPREF1120_08360 Exophiala dermatitidis HMPREF1120_08360 I
HMPREF1541_00486 Cyphellophora europaea HMPREF1541_00486 I
HMPREF1624_07934 Sporothrix schenckii HMPREF1624_07934 I
LEMA_P086810.1 Leptosphaeria maculans LEMA_P086810.1 I
M437DRAFT_37789 Aureobasidium melanogenum M437DRAFT_37789 I
M438DRAFT_349765 Aureobasidium pullulans M438DRAFT_349765 I
M7I_0147 Glarea lozoyensis M7I_0147 I
MAJ_06048 Metarhizium majus MAJ_06048 I
MAM_04081 Metarhizium album MAM_04081 I
MAPG_04630 Magnaporthe poae MAPG_04630 I
MBM_01879 Marssonina brunnea MBM_01879 I
MBR_06810 Metarhizium brunneum MBR_06810 I
MCYG_00012 Arthroderma otae MCYG_00012 I
MGG_03288 Magnaporthe oryzae MGG_03288 I
MGU_04555 Metarhizium guizhouense MGU_04555 I
MGYG_07213 Microsporum gypseum MGYG_07213 I
MPH_10251 Macrophomina phaseolina MPH_10251 I
Mycgr3G108163 Zymoseptoria tritici Mycgr3G108163 I
NechaG65174 Fusarium solani NechaG65174 I
OCS_04625 Ophiocordyceps sinensis OCS_04625 I
OIDMADRAFT_183172 Oidiodendron maius OIDMADRAFT_183172 I
PABG_06099 Paracoccidioides brasiliensis PABG_06099 I
PCH_Pc21g23040 Penicillium rubens PCH_Pc21g23040 I
PDE_00114 Penicillium oxalicum PDE_00114 I
PDIP_11330 Penicillium digitatum PDIP_11330 I
PEX1_102500 Penicillium expansum PEX1_102500 I
PFICI_09118 Pestalotiopsis fici PFICI_09118 I
PITC_032250 Penicillium italicum PITC_032250 I
PMAA_066500 Talaromyces marneffei PMAA_066500 I
PODANS_3_9690 Podospora anserina PODANS_3_9690 I
PTT_17883 Pyrenophora teres PTT_17883 I
PV04_02419 Capronia semiimmersa PV04_02419 I
PV05_07253 Exophiala xenobiotica PV05_07253 I
PV06_04889 Exophiala oligosperma PV06_04889 I
PV07_02787 Cladophialophora immunda PV07_02787 I
PV08_03184 Exophiala spinifera PV08_03184 I
PV09_04179 Verruconis gallopava PV09_04179 I
PV10_00861 Exophiala mesophila PV10_00861 I
PV11_03612 Exophiala sideris PV11_03612 I
PVAR5_7895 Byssochlamys spectabilis PVAR5_7895 I
S40285_02659 Stachybotrys chlorohalonata S40285_02659 I
S40288_02068 Stachybotrys chartarum S40288_02068 I
SAPIO_CDS1137 Scedosporium apiospermum SAPIO_CDS1137 I
SBOR_3479 Sclerotinia borealis SBOR_3479 I
SETTUDRAFT_163914 Setosphaeria turcica SETTUDRAFT_163914 I
SNOG_02426 Phaeosphaeria nodorum SNOG_02426 I
SPBR_00337 Sporothrix brasiliensis SPBR_00337 I
SS1G_00829 Sclerotinia sclerotiorum SS1G_00829 I
TEQG_08786 Trichophyton equinum TEQG_08786 I
TRIATDRAFT_141284 Trichoderma atroviride TRIATDRAFT_141284 I
TRIREDRAFT_22532 Trichoderma reesei TRIREDRAFT_22532 I
TRIVIDRAFT_2765 Trichoderma virens TRIVIDRAFT_2765 I
TRV_00423 Trichophyton verrucosum TRV_00423 I
TSTA_086630 Talaromyces stipitatus TSTA_086630 I
U727_00433202531 Penicillium solitum U727_00433202531 I
UCRNP2_8340 Neofusicoccum parvum UCRNP2_8340 I
UCRPA7_8182 Togninia minima UCRPA7_8182 I
UREG_02910 Uncinocarpus reesii UREG_02910 I
UV8b_475 Ustilaginoidea virens UV8b_475 I
V499_07882 Pseudogymnoascus pannorum V499_07882 I
VDAG_07716 Verticillium dahliae VDAG_07716 I
VDBG_05782 Verticillium alfalfae VDBG_05782 I
X797_000031 Metarhizium robertsii X797_000031 I
Z517_00401 Fonsecaea pedrosoi Z517_00401 I
Z518_01931 Rhinocladiella mackenziei Z518_01931 I
Z519_11346 Cladophialophora bantiana Z519_11346 I
estExt_fgenesh1_pg.C_80141 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_80141 I
estExt_fgenesh1_pg.C_chr_20607 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_20607 I
estExt_Genewise1Plus.C_sca_8_chr1_1_00454 Nectria haematococca estExt_Genewise1Plus.C_sca_8_chr1_1_00454 I
AB05384.1 Alternaria brassicicola AB05384.1 I
e_gw1.00042.98.1 Aspergillus carbonarius e_gw1.00042.98.1 I
estExt_Genewise1Plus.C_21231 Cryphonectria parasitica estExt_Genewise1Plus.C_21231 I
Pc21g23040 Penicillium chrysogenum Pc21g23040 I
PMAA_066500 Penicillium marneffei PMAA_066500 I
RO3G_01852 Rhizopus oryzae RO3G_01852 N
BAUCODRAFT_276951 Baudoinia compniacensis BAUCODRAFT_276951 N
BBA_07483 Beauveria bassiana BBA_07483 N
CCM_08924 Cordyceps militaris CCM_08924 N
DOTSEDRAFT_69470 Dothistroma septosporum DOTSEDRAFT_69470 N
MYCFIDRAFT_150893 Pseudocercospora fijiensis MYCFIDRAFT_150893 N
SEPMUDRAFT_146995 Sphaerulina musiva SEPMUDRAFT_146995 N
VHEMI01778 Torrubiella hemipterigena VHEMI01778 N
W97_09232 Coniosporium apollinis W97_09232 N
estExt_fgenesh1_pg.C_160018 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_160018 N
estExt_fgeneshMC_kg.C_70068 Mucor circinelloides estExt_fgeneshMC_kg.C_70068 N
fgeneshMC_pg.4_#_1012 Mucor circinelloides fgeneshMC_pg.4_#_1012 N