CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Duxbl1
(
Rattus norvegicus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSRNOG00000025408
T215448_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Duxbl1
M00502_2.00
Mus musculus
NWGATKRNNN
NNNYMATCWN
PBM
Berger et al.(2008)
Duxl_1286
0.816
0.947
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000044374
Homeodomain
15
71
RRRRIILNQSQKDTLRVWFEKNPNPDLATRGHLAKKLGISESQIMTWFQKHRKIRKQ
ENSRNOP00000044374
Homeodomain
95
150
GRSRTHFTKFQIDILIEAFEKNRFPGIVTREKLAQETGIPESRIHIWFQNRRARHP
ENSRNOP00000075215
Homeodomain
15
71
RRRRIILNQSQKDTLRVWFEKNPNPDLATRGHLAKKLGISESQIMTWFQKHRKIRKQ
Links
Other
Homeodomain
family TFs
Other
Rattus norvegicus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA008910
Anopheles arabiensis
AARA008910
N
AQUA003286
Anopheles quadriannulatus
AQUA003286
N