ENSSHAG00000015311 (Sarcophilus harrisii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSSHAG00000015311 T215709_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.867 1.000
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.867 1.000
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.867 1.000
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.867 1.000
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.867 1.000
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.865 0.982
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.865 0.982
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.865 0.982
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.982
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.865 0.982
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.865 0.930
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.865 0.930
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.865 0.930
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.865 0.930
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.865 0.930
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.860 0.982
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSHAP00000018034 Homeodomain 136 192

Links

Other Homeodomain family TFs
Other Sarcophilus harrisii TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
USF3 Tursiops truncatus ENSTTRG00000000281 N
USF3 Otolemur garnettii ENSOGAG00000032665 N
USF3 Ochotona princeps ENSOPRG00000014253 N
ENSPANG00000019193 Papio anubis ENSPANG00000019193 N
ENSPPYG00000013537 Pongo abelii ENSPPYG00000013537 N
USF3 Pan troglodytes ENSPTRG00000030159 N
USF3 Pteropus vampyrus ENSPVAG00000006151 N
Usf3 Rattus norvegicus ENSRNOG00000027756 N
ENSSHAG00000006667 Sarcophilus harrisii ENSSHAG00000006667 N
USF3 Sus scrofa ENSSSCG00000011918 N
ENSSTOG00000029223 Ictidomys tridecemlineatus ENSSTOG00000029223 N
ENSTGUG00000013363 Taeniopygia guttata ENSTGUG00000013363 N
USF3 Oryctolagus cuniculus ENSOCUG00000013550 N
USF3 Vicugna pacos ENSVPAG00000011950 N
Afo_R005482 Aptenodytes forsteri Afo_R005482 N
Alligator_sinensis_CCG000203.1 Alligator sinensis Alligator_sinensis_CCG000203.1 N
Brh_R007650 Buceros rhinoceros Brh_R007650 N
ENSP00000420721-D1 Bos grunniens ENSP00000420721-D1 N
ENSP00000420721 Macaca fascicularis ENSP00000420721 N
Gfo_R000246 Geospiza fortis Gfo_R000246 N
Myotis_brandtii_KIAA2018_10016078 Myotis brandtii Myotis_brandtii_KIAA2018_10016078 N
Pvit_04479 Pogona vitticeps Pvit_04479 N
Tal_R000800 Tyto alba Tal_R000800 N
usf3 Xenopus tropicalis XB-GENE-6459248 N
ENSGALG00000014808 Gallus gallus ENSGALG00000014808 N
ENSAMEG00000005235 Ailuropoda melanoleuca ENSAMEG00000005235 N
USF3 Bos taurus ENSBTAG00000021000 N
USF3 Canis familiaris ENSCAFG00000010692 N
USF3 Callithrix jacchus ENSCJAG00000020264 N
ENSCPOG00000006428 Cavia porcellus ENSCPOG00000006428 N
ENSCSAG00000006785 Chlorocebus sabaeus ENSCSAG00000006785 N
USF3 Dasypus novemcinctus ENSDNOG00000040900 N
USF3 Equus caballus ENSECAG00000024549 N
ENSFALG00000005129 Ficedula albicollis ENSFALG00000005129 N
USF3 Felis catus ENSFCAG00000004876 N
USF3 Homo sapiens ENSG00000176542 N
USF3 Anolis carolinensis ENSACAG00000006745 N
USF3 Gorilla gorilla ENSGGOG00000001005 N
ENSLACG00000009844 Latimeria chalumnae ENSLACG00000009844 N
USF3 Loxodonta africana ENSLAFG00000009455 N
ENSLOCG00000003056 Lepisosteus oculatus ENSLOCG00000003056 N
USF3 Meleagris gallopavo ENSMGAG00000014246 N
USF3 Myotis lucifugus ENSMLUG00000004274 N
USF3 Monodelphis domestica ENSMODG00000018158 N
Usf3 Mus musculus ENSMUSG00000068284 N
ENSNLEG00000004615 Nomascus leucogenys ENSNLEG00000004615 N
ENSOARG00000019468 Ovis aries ENSOARG00000019468 N