ENSTGUG00000016958 (Taeniopygia guttata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTGUG00000016958 T216350_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hoxc13
M00389_2.00 		Mus musculus
NTTWAYDRNN
NNYHRTWAAN		 PBM
Berger et al.(2008)
Hoxc13_3127 		0.840 0.895
HOXC13
M03129_2.00 		Homo sapiens
NTTTTATTRS
SYAATAAAAN		 SELEX
Jolma et al.(2013)
HOXC13_1 		0.840 0.895
HOXC13
M03130_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXC13_2 		0.840 0.895
HOXC13
M05072_2.00 		Homo sapiens
RKTTTATKGSN
NSCMATAAAMY		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_1 		0.840 0.895
HOXC13
M05073_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_2 		0.840 0.895
HOXC13
M10680_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXC13_Q2 		0.840 0.895
HOXC13
M05074_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Yin et al.(2017)
HOXC13_eDBD_Methyl-HT-SELEX 		0.840 0.895
Hoxa13
M00473_2.00 		Mus musculus
NTTWAYDRN
NYHRTWAAN		 PBM
Berger et al.(2008)
Hoxa13_3126 		0.836 0.860
HOXA13
M03098_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_1 		0.836 0.860
HOXA13
M03099_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_2 		0.836 0.860
HOXA13
M03100_2.00 		Homo sapiens
DKTTTATKRS
SYMATAAAMH		 SELEX
Jolma et al.(2013)
HOXA13_3 		0.836 0.860
HOXA13
M03101_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Jolma et al.(2013)
HOXA13_4 		0.836 0.860
HOXA13
M04977_2.00 		Homo sapiens
DTTTTATKGGB
VCCMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_1 		0.836 0.860
HOXA13
M04978_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_2 		0.836 0.860
HOXA13
M04981_2.00 		Homo sapiens
DTTTTATKRSN
NSYMATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_1 		0.836 0.860
HOXA13
M04982_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_2 		0.836 0.860
HOXA13
M09134_2.00 		Homo sapiens
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_HUMAN.H11MO.0.C 		0.836 0.860
Hoxa13
M09202_2.00 		Mus musculus
VDTWTWATKGS
SCMATWAWAHB		 Misc
Kulakovskiy et al.(2013)
HXA13_MOUSE.H11MO.0.C 		0.836 0.860
HOXA13
M10653_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_01 		0.836 0.860
HOXA13
M10654_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA13_02 		0.836 0.860
HOXA13
M04979_2.00 		Homo sapiens
DTTTTATTRSN
NSYAATAAAAH		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_1 		0.836 0.860
HOXA13
M04980_2.00 		Homo sapiens
NCTCGTAAAHN
NDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_2 		0.836 0.860
HOXA13
M04983_2.00 		Homo sapiens
DKTTTATTGBN
NVCAATAAAMH		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_1 		0.836 0.860
HOXA13
M04984_2.00 		Homo sapiens
NCTCGTAAAWH
DWTTTACGAGN		 SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_2 		0.836 0.860
HOXD13
M00299_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_REF 		0.831 0.825
Hoxd13
M00394_2.00 		Mus musculus
NWTHRYDDN
NHHRYDAWN		 PBM
Berger et al.(2008)
Hoxd13_2356 		0.831 0.825
HOXD13
M03141_2.00 		Homo sapiens
DTTTTATKRS
SYMATAAAAH		 SELEX
Jolma et al.(2013)
HOXD13_1 		0.831 0.825
HOXD13
M03142_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Jolma et al.(2013)
HOXD13_2 		0.831 0.825
Hoxd13
M03247_2.00 		Mus musculus
DKTTTATTRS
SYAATAAAMH		 SELEX
Jolma et al.(2013)
Hoxd13_1 		0.831 0.825
Hoxd13
M03248_2.00 		Mus musculus
DDTTTAYKAGN
NCTMRTAAAHH		 SELEX
Jolma et al.(2013)
Hoxd13_2 		0.831 0.825
HOXD13
M05122_2.00 		Homo sapiens
GKTTTATKGSS
SSCMATAAAMC		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_1 		0.831 0.825
HOXD13
M05123_2.00 		Homo sapiens
BCTCGTAAAMH
DKTTTACGAGV		 SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_2 		0.831 0.825
HOXD13
M10689_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD13_Q6 		0.831 0.825
HOXD13
M00295_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_N298S 		0.831 0.825
HOXD13
M05124_2.00 		Homo sapiens
DDTTTATTRBB
VVYAATAAAHH		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_1 		0.831 0.825
HOXD13
M05125_2.00 		Homo sapiens
VCTCGTAAAAH
DTTTTACGAGB		 SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_2 		0.831 0.825
HOXD13
M00300_2.00 		Homo sapiens
WTTTATDR
YHATAAAW		 PBM
Barrera et al.(2016)
HOXD13_S316C 		0.831 0.807
HOXD13
M00293_2.00 		Homo sapiens
NTTWAYDDNN
NNHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_I297V 		0.831 0.807
HOXD13
M00298_2.00 		Homo sapiens
NTTWAYDDN
NHHRTWAAN		 PBM
Barrera et al.(2016)
HOXD13_R306W 		0.824 0.807
hoxd13a
M02081_2.00 		Danio rerio
WTTTATDR
YHATAAAW		 PBM
Weirauch et al.(2014)
pTH6143 		0.817 0.789
HOXD13
M00294_2.00 		Homo sapiens
THGTWAAW
WTTWACDA		 PBM
Barrera et al.(2016)
HOXD13_I322L 		0.814 0.807
HOXB13
M02092_2.00 		Homo sapiens
NTTWAYDDNN
NNHHRTWAAN		 PBM
Weirauch et al.(2014)
pTH5808 		0.714 0.825
Hoxb13
M00505_2.00 		Mus musculus
NTTWAYDDNN
NNHHRTWAAN		 PBM
Berger et al.(2008)
Hoxb13_3479 		0.714 0.825
HOXB13
M03175_2.00 		Homo sapiens
DTTTTATKGG
CCMATAAAAH		 SELEX
Jolma et al.(2013)
HOXB13_1 		0.714 0.825
HOXB13
M03176_2.00 		Homo sapiens
BCTCGTAAAAH
DTTTTACGAGV		 SELEX
Jolma et al.(2013)
HOXB13_2 		0.714 0.825
HOXB13
M05201_2.00 		Homo sapiens
DTTTTATKGGN
NCCMATAAAAH		 SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_1 		0.714 0.825
HOXB13
M05202_2.00 		Homo sapiens
NCTCGTAAAHH
DDTTTACGAGN		 SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_2 		0.714 0.825
HOXB13
M09149_2.00 		Homo sapiens
TTTTATDRSN
NSYHATAAAA		 Misc
Kulakovskiy et al.(2013)
HXB13_HUMAN.H11MO.0.A 		0.714 0.825
HOXB13
M05203_2.00 		Homo sapiens
NCTCGTAAAAH
DTTTTACGAGN		 SELEX
Yin et al.(2017)
HOXB13_eDBD_Methyl-HT-SELEX 		0.714 0.825
CDX1
M10761_2.00 		Gallus gallus
BDBWAAK
MTTWVHV		 Transfac
Matys et al.(2006)
V$CDXA_01 		0.611 0.561
CDX1
M10762_2.00 		Gallus gallus
WWWWMYR
YRKWAWW		 Transfac
Matys et al.(2006)
V$CDXA_02 		0.611 0.561
Cdx2
M00447_2.00 		Mus musculus
NWWAYDRNN
NNYHRTWWN		 PBM
Berger et al.(2008)
Cdx2_4272 		0.599 0.561
CDX2
M03196_2.00 		Homo sapiens
KTTTATKRB
VYMATAAAM		 SELEX
Jolma et al.(2013)
CDX2_1 		0.599 0.561
CDX2
M05248_2.00 		Homo sapiens
NDTWAYRRYN
NRYYRTWAHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_1 		0.599 0.561
CDX2
M05249_2.00 		Homo sapiens
NDWWATKRB
VYMATWWHN		 SELEX
Yin et al.(2017)
CDX2_eDBD_HT-SELEX_2 		0.599 0.561
CDX2
M08131_2.00 		Homo sapiens
YTTTATKRCHB
VDGYMATAAAR		 ChIP-seq
Mathelier et al.(2014)
MA0465.1 		0.599 0.561
CDX2
M09152_2.00 		Homo sapiens
DTTBATKGCHNB
VNDGCMATVAAH		 Misc
Kulakovskiy et al.(2013)
CDX2_HUMAN.H11MO.0.A 		0.599 0.561
Cdx2
M09193_2.00 		Mus musculus
BTTTATKRCYBY
RVRGYMATAAAV		 Misc
Kulakovskiy et al.(2013)
CDX2_MOUSE.H11MO.0.A 		0.599 0.561
Cdx2
M09572_2.00 		Mus musculus
NTTTTATKRC
GYMATAAAAN		 Misc
Heinz et al.(2010)
mES-Cdx2_GSE14586 		0.599 0.561
CDX2
M10723_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_01 		0.599 0.561
CDX2
M10724_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5_02 		0.599 0.561
CDX2
M10725_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q5 		0.599 0.561
CDX2
M10726_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX2_Q6 		0.599 0.561
CDX2
M05250_2.00 		Homo sapiens
NRTCGTAWHBNN
NNVDWTACGAYN		 SELEX
Yin et al.(2017)
CDX2_eDBD_Methyl-HT-SELEX 		0.599 0.561
Cdx1
M00427_2.00 		Mus musculus
NWWATDRNN
NNYHATWWN		 PBM
Berger et al.(2008)
Cdx1_2245 		0.599 0.544
CDX1
M03115_2.00 		Homo sapiens
NTTTATKRB
VYMATAAAN		 SELEX
Jolma et al.(2013)
CDX1_1 		0.599 0.544
CDX1
M05018_2.00 		Homo sapiens
VKTTTATKRCN
NGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX1_eDBD_HT-SELEX 		0.599 0.544
CDX1
M09140_2.00 		Homo sapiens
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_HUMAN.H11MO.0.C 		0.599 0.544
Cdx1
M09186_2.00 		Mus musculus
HCWTAAAD
HTTTAWGD		 Misc
Kulakovskiy et al.(2013)
CDX1_MOUSE.H11MO.0.C 		0.599 0.544
CDX1
M10670_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q4 		0.599 0.544
CDX1
M10671_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CDX1_Q5 		0.599 0.544
CDX1
M05019_2.00 		Homo sapiens
NGTCGTAAAWB
VWTTTACGACN		 SELEX
Yin et al.(2017)
CDX1_eDBD_Methyl-HT-SELEX 		0.599 0.544
CDX4
M05129_2.00 		Homo sapiens
VKTTTATKRCH
DGYMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_HT-SELEX 		0.599 0.526
Cdx4
M09197_2.00 		Mus musculus
WGATTTATDRBH
DVYHATAAATCW		 Misc
Kulakovskiy et al.(2013)
CDX4_MOUSE.H11MO.0.A 		0.599 0.526
CDX4
M05130_2.00 		Homo sapiens
BGTCGTAAAHN
NDTTTACGACV		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_1 		0.599 0.526
CDX4
M05131_2.00 		Homo sapiens
VKTTTATKGCN
NGCMATAAAMB		 SELEX
Yin et al.(2017)
CDX4_FL_Methyl-HT-SELEX_2 		0.599 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000017241 Homeodomain 16 72

Links

Other Homeodomain family TFs
Other Taeniopygia guttata TFs

455 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HOX6 Oryza sativa OS09G0528200 D
PGSC0003DMG400017776 Solanum tuberosum PGSC0003DMG400017776 I
SapurV1A.2485s0010 Salix purpurea SapurV1A.2485s0010 I
SapurV1A.0617s0090 Salix purpurea SapurV1A.0617s0090 I
Cucsa.339580 Cucumis sativus Cucsa.339580 I
TRIUR3_11780 Triticum urartu TRIUR3_11780 I
Traes_5DL_96F9EED93 Triticum aestivum Traes_5DL_96F9EED93 I
Traes_5BL_9C32B27E2 Triticum aestivum Traes_5BL_9C32B27E2 I
Solyc03g034130.2 Solanum lycopersicum Solyc03g034130.2 I
Solyc03g034120.2 Solanum lycopersicum Solyc03g034120.2 I
Solyc03g034110.2 Solanum lycopersicum Solyc03g034110.2 I
PGSC0003DMG400017787 Solanum tuberosum PGSC0003DMG400017787 I
F775_30991 Aegilops tauschii F775_30991 I
PGSC0003DMG400017775 Solanum tuberosum PGSC0003DMG400017775 I
OPUNC09G15600 Oryza punctata OPUNC09G15600 I
OMERI09G12780 Oryza meridionalis OMERI09G12780 I
OB09G23870 Oryza brachyantha OB09G23870 I
MLOC_69710 Hordeum vulgare MLOC_69710 I
LPERR09G13180 Leersia perrieri LPERR09G13180 I
LPERR09G05860 Leersia perrieri LPERR09G05860 I
GSMUA_Achr1G16280_001 Musa acuminata GSMUA_Achr1G16280_001 I
Cagra.1511s0010 Capsella grandiflora Cagra.1511s0010 N
GSMUA_Achr7G25990_001 Musa acuminata GSMUA_Achr7G25990_001 N