ENSTGUG00000017371 (Taeniopygia guttata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSTGUG00000017371 T216354_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.744 0.391
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.744 0.391
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.744 0.391
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.744 0.391
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.744 0.391
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.744 0.391
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.744 0.391
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.744 0.391
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.744 0.391
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.717 0.261
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.717 0.261
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.717 0.261
Lhx4
M00430_2.00 		Mus musculus
NYAATHN
NDATTRN		 PBM
Berger et al.(2008)
Lhx4_1719 		0.377 1.000
Lhx4
M03257_2.00 		Mus musculus
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
Lhx4_1 		0.377 1.000
LHX4
M05063_2.00 		Homo sapiens
BYAATYRV
BYRATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_HT-SELEX 		0.377 1.000
LHX4
M05066_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
LHX4_FL_HT-SELEX 		0.377 1.000
LHX4
M05064_2.00 		Homo sapiens
BYAATTRV
BYAATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_1 		0.377 1.000
LHX4
M05065_2.00 		Homo sapiens
NTWAYGHN
NDCRTWAN		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_2 		0.377 1.000
LHX4
M05067_2.00 		Homo sapiens
NYAATTRN
NYAATTRN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_1 		0.377 1.000
LHX4
M05068_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_2 		0.377 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000017649 Homeodomain 76 121

Links

Other Homeodomain family TFs
Other Taeniopygia guttata TFs

1270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MNT Erinaceus europaeus ENSEEUG00000005745 I 0.000
Sakowv30028253m.g Saccoglossus kowalevskii Sakowv30028253m.g I 0.000
ENSSHAG00000011999 Sarcophilus harrisii ENSSHAG00000011999 N 0.000
fgenesh2_pg.scaffold_290000014 Branchiostoma floridae fgenesh2_pg.scaffold_290000014 N 0.000