CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000010539
(
Tarsius syrichta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSTSYG00000010539
T216872_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN
NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.696
0.261
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN
NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.696
0.261
VSX1
M04941_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.696
0.261
VSX1
M04944_2.00
Homo sapiens
NTAATTRS
SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.696
0.261
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN
NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.696
0.261
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN
NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.696
0.261
VSX1
M04943_2.00
Homo sapiens
YYAATTRN
NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.696
0.261
VSX1
M04945_2.00
Homo sapiens
NTAATTRG
CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.696
0.261
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.696
0.261
VAX1
M03168_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.676
0.391
VAX1
M05182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.676
0.391
VAX1
M05183_2.00
Homo sapiens
BTMATKRN
NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.676
0.391
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000009615
Homeodomain
19
64
RKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKM
Links
Other
Homeodomain
family TFs
Other
Tarsius syrichta
TFs
1225 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
D
Drosophila melanogaster
FBgn0000411
D
0.000
Sox21b
Drosophila melanogaster
FBgn0042630
D
0.000
LCUP001583
Lucilia cuprina
LCUP001583
I
0.000
GJ11555
Drosophila virilis
FBgn0198813
I
0.000
GJ11556
Drosophila virilis
FBgn0198814
I
0.000
GK17143
Drosophila willistoni
FBgn0219142
I
0.000
GK17144
Drosophila willistoni
FBgn0219143
I
0.000
GE20027
Drosophila yakuba
FBgn0237352
I
0.000
GE20028
Drosophila yakuba
FBgn0237353
I
0.000
GA23525
Drosophila pseudoobscura
FBgn0244926
I
0.000
HMEL002856
Heliconius melpomene
HMEL002856
I
0.000
HMEL003506
Heliconius melpomene
HMEL003506
I
0.000
KGM_03273
Danaus plexippus
KGM_03273
I
0.000
GD12627
Drosophila simulans
FBgn0184354
I
0.000
AALB009869
Anopheles albimanus
AALB009869
I
0.000
AARA005389
Anopheles arabiensis
AARA005389
I
0.000
AATE000638
Anopheles atroparvus
AATE000638
I
0.000
AATE010587
Anopheles atroparvus
AATE010587
I
0.000
ACOM022795
Anopheles coluzzii
ACOM022795
I
0.000
ACUA014541
Anopheles culicifacies
ACUA014541
I
0.000
MDOA009764
Musca domestica
MDOA009764
I
0.000
GG13733
Drosophila erecta
FBgn0105996
I
0.000
ADAC006830
Anopheles darlingi
ADAC006830
I
0.000
AGAP010919
Anopheles gambiae
AGAP010919
I
0.000
AGAP010922
Anopheles gambiae
AGAP010922
I
0.000
BGIBMGA003079
Bombyx mori
BGIBMGA003079
I
0.000
DAPPUDRAFT_18307
Daphnia pulex
DAPPUDRAFT_18307
I
0.000
DAPPUDRAFT_37091
Daphnia pulex
DAPPUDRAFT_37091
I
0.000
GA19209
Drosophila pseudoobscura
FBgn0079206
I
0.000
GF25205
Drosophila ananassae
FBgn0102197
I
0.000
GD12629
Drosophila simulans
FBgn0184356
I
0.000
GG13734
Drosophila erecta
FBgn0105997
I
0.000
GH16344
Drosophila grimshawi
FBgn0123815
I
0.000
GI11536
Drosophila mojavensis
FBgn0134296
I
0.000
GI11537
Drosophila mojavensis
FBgn0134297
I
0.000
GL24831
Drosophila persimilis
FBgn0162419
I
0.000
GM24555
Drosophila sechellia
FBgn0179418
I
0.000
GM24556
Drosophila sechellia
FBgn0179419
I
0.000
AAEL000893
Aedes aegypti
AAEL000893
I
0.000