ENSXMAG00000016285 (Xiphophorus maculatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSXMAG00000016285 T217261_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pbx1
M00513_2.00 		Mus musculus
NNDKANNNN
NNNNTMHNN		 PBM
Berger et al.(2008)
Pbx1_3203 		0.867 1.000
PBX1
M05362_2.00 		Homo sapiens
NTGATKGAYR
YRTCMATCAN		 SELEX
Yin et al.(2017)
PBX1_eDBD_HT-SELEX 		0.867 1.000
PBX1
M05364_2.00 		Homo sapiens
DTGMTKGRYN
NRYCMAKCAH		 SELEX
Yin et al.(2017)
PBX1_FL_HT-SELEX 		0.867 1.000
PBX1
M02685_2.00 		Homo sapiens
WWTGATTGATND
HNATCAATCAWW		 SELEX
Mathelier et al.(2014)
MA0070.1 		0.867 1.000
PBX1
M09164_2.00 		Homo sapiens
DGABTGRCRG
CYGYCAVTCH		 Misc
Kulakovskiy et al.(2013)
PBX1_HUMAN.H11MO.0.A 		0.867 1.000
PBX1
M09561_2.00 		Homo sapiens
TGABTGACAGSC
GSCTGTCAVTCA		 Misc
Heinz et al.(2010)
MCF7-PBX1_GSE28007 		0.867 1.000
PBX1
M10748_2.00 		Homo sapiens
WTKATTRDT
AHYAATMAW		 Transfac
Matys et al.(2006)
V$PBX1_01 		0.867 1.000
PBX1
M10749_2.00 		Homo sapiens
DNHTTGATTGATKDB
VHMATCAATCAADNH		 Transfac
Matys et al.(2006)
V$PBX1_02 		0.867 1.000
PBX1
M10750_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_03 		0.867 1.000
PBX1
M10751_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_05 		0.867 1.000
PBX1
M10752_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_10 		0.867 1.000
PBX1
M10753_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX1_Q3 		0.867 1.000
PBX1
M05363_2.00 		Homo sapiens
DTGAKKGAYG
CRTCMMTCAH		 SELEX
Yin et al.(2017)
PBX1_eDBD_Methyl-HT-SELEX 		0.867 1.000
PBX1
M05365_2.00 		Homo sapiens
MRTCAATCMH
DKGATTGAYK		 SELEX
Yin et al.(2017)
PBX1_FL_Methyl-HT-SELEX 		0.867 1.000
pbx4
M02110_2.00 		Tetraodon nigroviridis
TTGAYGDV
BHCRTCAA		 PBM
Weirauch et al.(2014)
pTH6425 		0.867 0.982
PBX2
M08134_2.00 		Homo sapiens
NWGAKTGACABN
NVTGTCAMTCWN		 ChIP-seq
Mathelier et al.(2014)
MA1113.1 		0.867 0.965
PBX2
M09165_2.00 		Homo sapiens
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_HUMAN.H11MO.0.C 		0.867 0.965
Pbx2
M09199_2.00 		Mus musculus
KRVHKTGATTGAWKN
NMWTCAATCAMDBYM		 Misc
Kulakovskiy et al.(2013)
PBX2_MOUSE.H11MO.0.C 		0.867 0.965
Pbx3
M09205_2.00 		Mus musculus
BBBTGATTGRYNDN
NHNRYCAATCAVVV		 Misc
Kulakovskiy et al.(2013)
PBX3_MOUSE.H11MO.0.A 		0.865 0.965
exd
M06487_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Mathelier et al.(2014)
MA0222.1 		0.822 0.947
exd
M06243_2.00 		Drosophila melanogaster
YRTCAAAN
NTTTGAYR		 B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611 		0.822 0.947
exd
M06244_2.00 		Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN		 B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611 		0.822 0.947
exd
M06245_2.00 		Drosophila melanogaster
NDTGAYRW
WYRTCAHN		 B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611 		0.822 0.947
exd
M06246_2.00 		Drosophila melanogaster
NNDTGAYR
YRTCAHNN		 B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611 		0.822 0.947
PBX4
M00277_2.00 		Homo sapiens
NNDDWHDNNN
NNNHDWHHNN		 PBM
Barrera et al.(2016)
PBX4_REF 		0.815 0.877
PBX4
M10649_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PBX4_01 		0.815 0.877
CBG10835
M01243_2.00 		Caenorhabditis briggsae
NNTKAYDNN
NNHRTMANN		 PBM
Lambert et al.(2019)
pTH11444 		0.691 0.579
PBX4
M00276_2.00 		Homo sapiens
NYTAATTADNN
NNHTAATTARN		 PBM
Barrera et al.(2016)
PBX4_R215Q 		0.677 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000016318 Homeodomain 146 205

Links

Other Homeodomain family TFs
Other Xiphophorus maculatus TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HSFY2 Homo sapiens ENSG00000169953 D
HSFY1 Homo sapiens ENSG00000172468 D
HSF5 Homo sapiens ENSG00000176160 D
HSF5 Procavia capensis ENSPCAG00000011323 I
ENSSTOG00000020272 Ictidomys tridecemlineatus ENSSTOG00000020272 I
HSF5 Sus scrofa ENSSSCG00000017641 I
ENSSSCG00000012732 Sus scrofa ENSSSCG00000012732 I
Hsfy2 Rattus norvegicus ENSRNOG00000038569 I
HSF5 Pteropus vampyrus ENSPVAG00000002322 I
HSF5 Pan troglodytes ENSPTRG00000009453 I
ENSPPYG00000008231 Pongo abelii ENSPPYG00000008231 I
ENSSTOG00000025684 Ictidomys tridecemlineatus ENSSTOG00000025684 I
ENSOGAG00000026441 Otolemur garnettii ENSOGAG00000026441 I
ENSOCUG00000025707 Oryctolagus cuniculus ENSOCUG00000025707 I
ENSOARG00000003920 Ovis aries ENSOARG00000003920 I
ENSOARG00000002879 Ovis aries ENSOARG00000002879 I
ENSOANG00000028803 Ornithorhynchus anatinus ENSOANG00000028803 I
ENSOANG00000001091 Ornithorhynchus anatinus ENSOANG00000001091 I
Hsf5 Mus musculus ENSMUSG00000070345 I
ENSACAG00000008631 Anolis carolinensis ENSACAG00000008631 I
ENSMODG00000028107 Monodelphis domestica ENSMODG00000028107 I
ENSMODG00000027398 Monodelphis domestica ENSMODG00000027398 I
Aan_R010039 Calypte anna Aan_R010039 I
DICVIV_13476 Dictyocaulus viviparus DICVIV_13476 I
Tal_R003042 Tyto alba Tal_R003042 I
Pvit_14501 Pogona vitticeps Pvit_14501 I
Ogr08578 Ophisaurus gracilis Ogr08578 I
Myotis_brandtii_HSFY1_10020625 Myotis brandtii Myotis_brandtii_HSFY1_10020625 I
Gfo_R015012 Geospiza fortis Gfo_R015012 I
ENSBTAP00000047496-D1 Bos grunniens ENSBTAP00000047496-D1 I
ENSBTAP00000044770-D1 Bos grunniens ENSBTAP00000044770-D1 I
Cmyd_10018130 Chelonia mydas Cmyd_10018130 I
Afo_R012751 Aptenodytes forsteri Afo_R012751 I
Hsfy2 Mus musculus ENSMUSG00000045336 I
ENSVPAG00000010189 Vicugna pacos ENSVPAG00000010189 I
ENSVPAG00000006426 Vicugna pacos ENSVPAG00000006426 I
ENSVPAG00000005620 Vicugna pacos ENSVPAG00000005620 I
ENSVPAG00000004671 Vicugna pacos ENSVPAG00000004671 I
ENSVPAG00000004400 Vicugna pacos ENSVPAG00000004400 I
ENSVPAG00000003548 Vicugna pacos ENSVPAG00000003548 I
ENSVPAG00000003263 Vicugna pacos ENSVPAG00000003263 I
ENSTRUG00000010837 Takifugu rubripes ENSTRUG00000010837 I
ENSTGUG00000006066 Taeniopygia guttata ENSTGUG00000006066 I
ENSTGUG00000006065 Taeniopygia guttata ENSTGUG00000006065 I
ENSCPOG00000021607 Cavia porcellus ENSCPOG00000021607 I
ENSGALG00000019262 Gallus gallus ENSGALG00000019262 I
ENSECAG00000008708 Equus caballus ENSECAG00000008708 I
ENSMLUG00000030480 Myotis lucifugus ENSMLUG00000030480 I
ENSECAG00000000093 Equus caballus ENSECAG00000000093 I
ENSDNOG00000045058 Dasypus novemcinctus ENSDNOG00000045058 I
ENSDNOG00000031164 Dasypus novemcinctus ENSDNOG00000031164 I
ENSDNOG00000015218 Dasypus novemcinctus ENSDNOG00000015218 I
HSF5 Dasypus novemcinctus ENSDNOG00000014871 I
ENSCSAG00000018308 Chlorocebus sabaeus ENSCSAG00000018308 I
ENSCPOG00000027550 Cavia porcellus ENSCPOG00000027550 I
ENSECAG00000008677 Equus caballus ENSECAG00000008677 I
ENSCJAG00000032803 Callithrix jacchus ENSCJAG00000032803 I
ENSCAFG00000029639 Canis familiaris ENSCAFG00000029639 I
ENSCAFG00000023067 Canis familiaris ENSCAFG00000023067 I
HSF5 Canis familiaris ENSCAFG00000017528 I
ENSBTAG00000047120 Bos taurus ENSBTAG00000047120 I
ENSBTAG00000046306 Bos taurus ENSBTAG00000046306 I
ENSBTAG00000036343 Bos taurus ENSBTAG00000036343 I
ENSBTAG00000033445 Bos taurus ENSBTAG00000033445 I
HSF5 Bos taurus ENSBTAG00000001166 I
ENSAMEG00000014907 Ailuropoda melanoleuca ENSAMEG00000014907 I
ENSMLUG00000015387 Myotis lucifugus ENSMLUG00000015387 I
ENSMLUG00000028032 Myotis lucifugus ENSMLUG00000028032 I
ENSMLUG00000024907 Myotis lucifugus ENSMLUG00000024907 I
ENSMLUG00000022730 Myotis lucifugus ENSMLUG00000022730 I
HSF5 Gorilla gorilla ENSGGOG00000013788 I
ENSMGAG00000013753 Meleagris gallopavo ENSMGAG00000013753 I
ENSMGAG00000003672 Meleagris gallopavo ENSMGAG00000003672 I
ENSLAFG00000031072 Loxodonta africana ENSLAFG00000031072 I
ENSLACG00000012431 Latimeria chalumnae ENSLACG00000012431 I
ENSLAFG00000016976 Loxodonta africana ENSLAFG00000016976 I
ENSMEUG00000007286 Macropus eugenii ENSMEUG00000007286 I
ENSLOCG00000014483 Lepisosteus oculatus ENSLOCG00000014483 I
ENSMEUG00000003908 Macropus eugenii ENSMEUG00000003908 I
ENSOARG00000003931 Ovis aries ENSOARG00000003931 N
ENSOARG00000002777 Ovis aries ENSOARG00000002777 N
ENSOARG00000001582 Ovis aries ENSOARG00000001582 N
ENSOARG00000009065 Ovis aries ENSOARG00000009065 N
ENSBTAP00000045775-D1 Bos grunniens ENSBTAP00000045775-D1 N
ENSBTAG00000046035 Bos taurus ENSBTAG00000046035 N
ENSOARG00000009275 Ovis aries ENSOARG00000009275 N
ENSBTAG00000034444 Bos taurus ENSBTAG00000034444 N
ENSBTAG00000033874 Bos taurus ENSBTAG00000033874 N
ENSMLUG00000025735 Myotis lucifugus ENSMLUG00000025735 N
ENSMLUG00000026997 Myotis lucifugus ENSMLUG00000026997 N
yakG016733 Bos grunniens yakG016733 N
ENSOARG00000009396 Ovis aries ENSOARG00000009396 N