BLH3 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 fgenesh2_kg.2__1821__AT1G75410.1 T218456_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.778 0.653
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.634 0.551
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.610 0.408
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.610 0.408
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.610 0.408
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.610 0.408
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.601 0.429
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.601 0.408
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.600 0.388
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.2__1821__AT1G75410.1 Homeodomain 355 406

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

1212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF319 Tursiops truncatus ENSTTRG00000008426 N 0.000
ENSOARG00000001098 Ovis aries ENSOARG00000001098 N 0.000
ZNF319 Otolemur garnettii ENSOGAG00000003269 N 0.000
ENSPANG00000015991 Papio anubis ENSPANG00000015991 N 0.000
ENSPSIG00000004303 Pelodiscus sinensis ENSPSIG00000004303 N 0.000
ZNF319 Pteropus vampyrus ENSPVAG00000004612 N 0.000
Zfp319 Rattus norvegicus ENSRNOG00000013460 N 0.000
ENSSTOG00000019944 Ictidomys tridecemlineatus ENSSTOG00000019944 N 0.000
ZNF319 Taeniopygia guttata ENSTGUG00000004796 N 0.000
ENSNLEG00000003339 Nomascus leucogenys ENSNLEG00000003339 N 0.000
Aan_R013485 Calypte anna Aan_R013485 N 0.000
Afo_R001817 Aptenodytes forsteri Afo_R001817 N 0.000
Cmyd_10003977 Chelonia mydas Cmyd_10003977 N 0.000
ENSP00000299237-D1 Bos grunniens ENSP00000299237-D1 N 0.000
ENSP00000299237 Macaca fascicularis ENSP00000299237 N 0.000
Gfo_R016059 Geospiza fortis Gfo_R016059 N 0.000
Pvit_06816 Pogona vitticeps Pvit_06816 N 0.000
Tal_R002390 Tyto alba Tal_R002390 N 0.000
ZNF319 Felis catus ENSFCAG00000024689 N 0.000
ENSAMEG00000017202 Ailuropoda melanoleuca ENSAMEG00000017202 N 0.000
ENSAPLG00000002277 Anas platyrhynchos ENSAPLG00000002277 N 0.000
ZNF319 Bos taurus ENSBTAG00000045572 N 0.000
ZNF319 Canis familiaris ENSCAFG00000008559 N 0.000
ENSCSAG00000018864 Chlorocebus sabaeus ENSCSAG00000018864 N 0.000
ZNF319 Dasypus novemcinctus ENSDNOG00000042239 N 0.000
ENSDORG00000001887 Dipodomys ordii ENSDORG00000001887 N 0.000
ENSFALG00000014292 Ficedula albicollis ENSFALG00000014292 N 0.000
ZNF319 Anolis carolinensis ENSACAG00000026479 N 0.000
ZNF319 Homo sapiens ENSG00000166188 N 0.000
ZNF319 Gallus gallus ENSGALG00000000999 N 0.000
ZNF319 Gorilla gorilla ENSGGOG00000017145 N 0.000
ZNF319 Loxodonta africana ENSLAFG00000002266 N 0.000
ZNF319 Microcebus murinus ENSMICG00000004897 N 0.000
ZNF319 Macaca mulatta ENSMMUG00000022668 N 0.000
ENSMPUG00000004675 Mustela putorius furo ENSMPUG00000004675 N 0.000
Zfp319 Mus musculus ENSMUSG00000046556 N 0.000