ATHB52 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 fgenesh2_kg.8__1293__AT5G53980.1 T218486_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.709 0.614
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.709 0.614
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.689 0.579
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.689 0.579
ATHB-51
M00867_2.00 		Arabidopsis thaliana
ATWATKNN
NNMATWAT		 PBM
Franco-Zorrilla et al.(2014)
ATHB51 		0.652 0.544
ATHB-51
M06927_2.00 		Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH		 Dap-seq
OMalley et al.(2016)
LMI1_col_a 		0.652 0.544
ATHB-51
M06928_2.00 		Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN		 Dap-seq
OMalley et al.(2016)
LMI1_colamp_a 		0.652 0.544
ATHB-22
M02041_2.00 		Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN		 PBM
Weirauch et al.(2014)
pTH5883 		0.648 0.526
ATHB-12
M00865_2.00 		Arabidopsis thaliana
NNNNNNNN
NNNNNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATHB12 		0.603 0.526
ATHB-12
M02045_2.00 		Arabidopsis thaliana
BHWWWWWWDV
BHWWWWWWDV		 PBM
Weirauch et al.(2014)
pTH7207 		0.603 0.526
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.8__1293__AT5G53980.1 Homeodomain 9 65

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SREBF1 Homo sapiens ENSG00000072310 D
SREBF2 Homo sapiens ENSG00000198911 D
Srebf1 Mus musculus ENSMUSG00000020538 D
Srebf2 Mus musculus ENSMUSG00000022463 D
HLH106 Drosophila melanogaster FBgn0261283 D
CpipJ_CPIJ008607 Culex pipiens CpipJ_CPIJ008607 I
CpipJ_CPIJ018167 Culex pipiens CpipJ_CPIJ018167 I
AAEL010555 Aedes aegypti AAEL010555 I
ACYPI005432 Acyrthosiphon pisum ACYPI005432 I
ADAC008255 Anopheles darlingi ADAC008255 I
AGAP000076 Anopheles gambiae AGAP000076 I
BGIBMGA001211 Bombyx mori BGIBMGA001211 I
CapteG165299 Capitella teleta CapteG165299 I
CGI_10004108 Crassostrea gigas CGI_10004108 I
CPIJ008607 Culex quinquefasciatus CPIJ008607 I
CPIJ018167 Culex quinquefasciatus CPIJ018167 I
DAPPUDRAFT_201893 Daphnia pulex DAPPUDRAFT_201893 I
SREBF1 Anolis carolinensis ENSACAG00000001181 I
SREBF2 Anolis carolinensis ENSACAG00000004146 I
ENSAMEG00000005129 Ailuropoda melanoleuca ENSAMEG00000005129 I
ENSAMEG00000015506 Ailuropoda melanoleuca ENSAMEG00000015506 I
ENSAMXG00000008028 Astyanax mexicanus ENSAMXG00000008028 I
ENSAMXG00000009016 Astyanax mexicanus ENSAMXG00000009016 I
ENSAPLG00000003145 Anas platyrhynchos ENSAPLG00000003145 I
SREBF1 Bos taurus ENSBTAG00000007884 I
SREBF2 Bos taurus ENSBTAG00000014265 I
SREBF2 Canis familiaris ENSCAFG00000001013 I
SREBF1 Canis familiaris ENSCAFG00000018436 I
ENSCJAG00000002378 Callithrix jacchus ENSCJAG00000002378 I
SREBF1 Callithrix jacchus ENSCJAG00000008953 I
SREBF1 Cavia porcellus ENSCPOG00000002439 I
SREBF2 Cavia porcellus ENSCPOG00000013199 I
ENSCSAG00000005734 Chlorocebus sabaeus ENSCSAG00000005734 I
srebf2 Danio rerio ENSDARG00000063438 I
srebf1 Danio rerio ENSDARG00000067607 I
SREBF2 Dasypus novemcinctus ENSDNOG00000048031 I
Srebf2 Dipodomys ordii ENSDORG00000000691 I
Srebf1 Dipodomys ordii ENSDORG00000012333 I
SREBF1 Equus caballus ENSECAG00000019802 I
SREBF2 Equus caballus ENSECAG00000024608 I
SREBF2 Erinaceus europaeus ENSEEUG00000003437 I
SREBF2 Echinops telfairi ENSETEG00000000459 I
SREBF1 Echinops telfairi ENSETEG00000004179 I
ENSFALG00000011811 Ficedula albicollis ENSFALG00000011811 I
ENSFALG00000013762 Ficedula albicollis ENSFALG00000013762 I
SREBF1 Felis catus ENSFCAG00000001983 I
SREBF2 Felis catus ENSFCAG00000014289 I
srebf2 Gasterosteus aculeatus ENSGACG00000007259 I
srebf1 Gasterosteus aculeatus ENSGACG00000012064 I
ENSGALG00000011916 Gallus gallus ENSGALG00000011916 I
SREBF1 Gallus gallus ENSGALG00000027188 I
SREBF1 Gorilla gorilla ENSGGOG00000002713 I
SREBF2 Gorilla gorilla ENSGGOG00000012065 I
ENSGMOG00000006325 Gadus morhua ENSGMOG00000006325 I
ENSGMOG00000011626 Gadus morhua ENSGMOG00000011626 I
ENSLACG00000013149 Latimeria chalumnae ENSLACG00000013149 I
SREBF2 Loxodonta africana ENSLAFG00000005791 I
SREBF1 Loxodonta africana ENSLAFG00000021644 I
ENSLOCG00000008766 Lepisosteus oculatus ENSLOCG00000008766 I
ENSLOCG00000011887 Lepisosteus oculatus ENSLOCG00000011887 I
ENSMEUG00000001306 Macropus eugenii ENSMEUG00000001306 I
ENSMEUG00000011986 Macropus eugenii ENSMEUG00000011986 I
SREBF2 Meleagris gallopavo ENSMGAG00000012074 I
SREBF2 Microcebus murinus ENSMICG00000000913 I
SREBF1 Microcebus murinus ENSMICG00000012535 I
SREBF2 Myotis lucifugus ENSMLUG00000002549 I
SREBF2 Macaca mulatta ENSMMUG00000003357 I
SREBF1 Macaca mulatta ENSMMUG00000023375 I
SREBF1 Monodelphis domestica ENSMODG00000014074 I
SREBF2 Monodelphis domestica ENSMODG00000016612 I
ENSMPUG00000000024 Mustela putorius furo ENSMPUG00000000024 I
ENSMPUG00000016372 Mustela putorius furo ENSMPUG00000016372 I
ENSNLEG00000013625 Nomascus leucogenys ENSNLEG00000013625 I
SREBF2 Ornithorhynchus anatinus ENSOANG00000002461 I
SREBF1 Ornithorhynchus anatinus ENSOANG00000012278 I
ENSOARG00000001504 Ovis aries ENSOARG00000001504 I
ENSOARG00000018717 Ovis aries ENSOARG00000018717 I
SREBF2 Oryctolagus cuniculus ENSOCUG00000003178 I
SREBF1 Otolemur garnettii ENSOGAG00000002910 I
SREBF2 Otolemur garnettii ENSOGAG00000014736 I
ENSONIG00000002304 Oreochromis niloticus ENSONIG00000002304 I
ENSONIG00000008375 Oreochromis niloticus ENSONIG00000008375 I
SREBF1 Ochotona princeps ENSOPRG00000015069 I
srebf1 Oryzias latipes ENSORLG00000009437 I
srebf2 Oryzias latipes ENSORLG00000014672 I
ENSPANG00000008691 Papio anubis ENSPANG00000008691 I
ENSPANG00000023675 Papio anubis ENSPANG00000023675 I
SREBF2 Procavia capensis ENSPCAG00000006497 I
SREBF1 Procavia capensis ENSPCAG00000014903 I
ENSPFOG00000000475 Poecilia formosa ENSPFOG00000000475 I
ENSPFOG00000010306 Poecilia formosa ENSPFOG00000010306 I
ENSPMAG00000001400 Petromyzon marinus ENSPMAG00000001400 I
ENSPMAG00000009384 Petromyzon marinus ENSPMAG00000009384 I
ENSPPYG00000008037 Pongo abelii ENSPPYG00000008037 I
ENSPPYG00000011880 Pongo abelii ENSPPYG00000011880 I
ENSPSIG00000005996 Pelodiscus sinensis ENSPSIG00000005996 I
ENSPSIG00000014746 Pelodiscus sinensis ENSPSIG00000014746 I
SREBF2 Pan troglodytes ENSPTRG00000014439 I
SREBF2 Pteropus vampyrus ENSPVAG00000001177 I
SREBF1 Pteropus vampyrus ENSPVAG00000005765 I
Srebf1 Rattus norvegicus ENSRNOG00000003463 I
Srebf2 Rattus norvegicus ENSRNOG00000007400 I
ENSSARG00000002330 Sorex araneus ENSSARG00000002330 I
ENSSARG00000006597 Sorex araneus ENSSARG00000006597 I
ENSSHAG00000011682 Sarcophilus harrisii ENSSHAG00000011682 I
ENSSHAG00000018607 Sarcophilus harrisii ENSSHAG00000018607 I
ENSSSCG00000023124 Sus scrofa ENSSSCG00000023124 I
SREBF2 Sus scrofa ENSSSCG00000026092 I
ENSSTOG00000012916 Ictidomys tridecemlineatus ENSSTOG00000012916 I
ENSSTOG00000014939 Ictidomys tridecemlineatus ENSSTOG00000014939 I
SREBF2 Tupaia belangeri ENSTBEG00000016542 I
SREBF1 Taeniopygia guttata ENSTGUG00000007313 I
ENSTGUG00000009772 Taeniopygia guttata ENSTGUG00000009772 I
srebf2 Tetraodon nigroviridis ENSTNIG00000010835 I
srebf1 Tetraodon nigroviridis ENSTNIG00000011957 I
srebf2 Takifugu rubripes ENSTRUG00000007413 I
srebf1 Takifugu rubripes ENSTRUG00000008197 I
SREBF2 Tursiops truncatus ENSTTRG00000017350 I
ENSXMAG00000003080 Xiphophorus maculatus ENSXMAG00000003080 I
ENSXMAG00000014774 Xiphophorus maculatus ENSXMAG00000014774 I
SREBP Drosophila pseudoobscura FBgn0081122 I
SREBP Drosophila ananassae FBgn0100584 I
SREBP Drosophila erecta FBgn0108291 I
SREBP Drosophila grimshawi FBgn0122129 I
SREBP Drosophila mojavensis FBgn0134398 I
SREBP Drosophila persimilis FBgn0153336 I
SREBP Drosophila sechellia FBgn0174544 I
SREBP Drosophila simulans FBgn0186498 I
SREBP Drosophila virilis FBgn0198580 I
SREBP Drosophila willistoni FBgn0219495 I
SREBP Drosophila yakuba FBgn0236960 I
GB54953 Apis mellifera GB54953 I
HelroG138368 Helobdella robusta HelroG138368 I
HelroG66987 Helobdella robusta HelroG66987 I
HMEL008680 Heliconius melpomene HMEL008680 I
KGM_21476 Danaus plexippus KGM_21476 I
L798_14382 Zootermopsis nevadensis L798_14382 I
LotgiG224211 Lottia gigantea LotgiG224211 I
MESCA001239 Megaselia scalaris MESCA001239 I
NV10553 Nasonia vitripennis NV10553 I
RPRC014734 Rhodnius prolixus RPRC014734 I
SINV16629 Solenopsis invicta SINV16629 I
SMAR011485 Strigamia maritima SMAR011485 I
TC007163 Tribolium castaneum TC007163 I
tetur08g03870 Tetranychus urticae tetur08g03870 I
YQE_07365 Dendroctonus ponderosae YQE_07365 I
Aan_R009070 Calypte anna Aan_R009070 I
Aan_R013218 Calypte anna Aan_R013218 I
Afo_R007963 Aptenodytes forsteri Afo_R007963 I
Alligator_sinensis_CCG007971.1 Alligator sinensis Alligator_sinensis_CCG007971.1 I
Alligator_sinensis_CCG012315.1 Alligator sinensis Alligator_sinensis_CCG012315.1 I
Cmyd_10007930 Chelonia mydas Cmyd_10007930 I
Cmyd_10008393 Chelonia mydas Cmyd_10008393 I
ENSBTAP00000018956-D1 Bos grunniens ENSBTAP00000018956-D1 I
ENSP00000348069-D1 Bos grunniens ENSP00000348069-D1 I
ENSP00000348069 Macaca fascicularis ENSP00000348069 I
ENSP00000354476 Macaca fascicularis ENSP00000354476 I
Gfo_R004756 Geospiza fortis Gfo_R004756 I
Gfo_R006283 Geospiza fortis Gfo_R006283 I
Hsal_02671--XP_396866.3_APIME Harpegnathos saltator Hsal_02671--XP_396866.3_APIME I
Myotis_brandtii_SREBF1_10023215 Myotis brandtii Myotis_brandtii_SREBF1_10023215 I
Myotis_brandtii_SREBF2_10014539 Myotis brandtii Myotis_brandtii_SREBF2_10014539 I
Ogr11708 Ophisaurus gracilis Ogr11708 I
Ogr14454 Ophisaurus gracilis Ogr14454 I
Pvit_05020 Pogona vitticeps Pvit_05020 I
Pvit_18605 Pogona vitticeps Pvit_18605 I
Tal_R010023 Tyto alba Tal_R010023 I
Ocbimv22024635m.g Octopus bimaculoides Ocbimv22024635m.g I
Sakowv30028178m.g Saccoglossus kowalevskii Sakowv30028178m.g I
HHAL003331-PA Halyomorpha halys HHAL003331-PA I
LCUP004742 Lucilia cuprina LCUP004742 I
srebf2 Xenopus tropicalis XB-GENE-1011360 I
srebf2.L Xenopus laevis XB-GENE-1011364 I
srebf1 Xenopus tropicalis XB-GENE-987572 I
XP_002944649 Xenopus tropicalis XP_002944649 I
AALB006631 Anopheles albimanus AALB006631 I
AARA001097 Anopheles arabiensis AARA001097 I
AATE001073 Anopheles atroparvus AATE001073 I
ACHR009884 Anopheles christyi ACHR009884 I
ACOM033566 Anopheles coluzzii ACOM033566 I
ACUA020889 Anopheles culicifacies ACUA020889 I
ADIR000987 Anopheles dirus ADIR000987 I
AEPI007594 Anopheles epiroticus AEPI007594 I
AFAF018960 Anopheles farauti AFAF018960 I
AFUN011560 Anopheles funestus AFUN011560 I
AMAM021165 Anopheles maculatus AMAM021165 I
AMEC015010 Anopheles melas AMEC015010 I
AMEM008702 Anopheles merus AMEM008702 I
AMIN002144 Anopheles minimus AMIN002144 I
AQUA008327 Anopheles quadriannulatus AQUA008327 I
ASIS002143 Anopheles sinensis ASIS002143 I
ASTEI06218 Anopheles stephensi ASTEI06218 I
MDOA000648 Musca domestica MDOA000648 I
PPAI004928 Phlebotomus papatasi PPAI004928 I
ANCCAN_02634 Ancylostoma caninum ANCCAN_02634 I
ANCCEY_06558 Ancylostoma ceylanicum ANCCEY_06558 I
DICVIV_05621 Dictyocaulus viviparus DICVIV_05621 I
HCOI01299300 Haemonchus contortus HCOI01299300 I
HCOI02041100 Haemonchus contortus HCOI02041100 I
L596_g18997 Steinernema carpocapsae L596_g18997 I
L889_g16826 Steinernema feltiae L889_g16826 I
L892_g28061 Steinernema scapterisci L892_g28061 I
L893_g8503 Steinernema glaseri L893_g8503 I
L898_g465 Steinernema monticolum L898_g465 I
NBR_0002173001 Nippostrongylus brasiliensis NBR_0002173001 I
NECAME_14255 Necator americanus NECAME_14255 I
TELCIR_06021 Teladorsagia circumcincta TELCIR_06021 I
TELCIR_07862 Teladorsagia circumcincta TELCIR_07862 I