CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA07G01950
(
Glycine max
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GLYMA07G01950
T218779_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT
AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.867
1.000
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.867
1.000
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.861
0.911
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.861
0.911
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.861
0.911
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA07G01950.1
Homeodomain
16
75
GKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ
Links
Other
Homeodomain
family TFs
Other
Glycine max
TFs
335 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC05G23730
Oryza punctata
OPUNC05G23730
N
Pavir.J28254
Panicum virgatum
Pavir.J28254
N
Pavir.J09915
Panicum virgatum
Pavir.J09915
N
Traes_1DL_10172C13A
Triticum aestivum
Traes_1DL_10172C13A
N
Traes_1BL_B30884E0E
Triticum aestivum
Traes_1BL_B30884E0E
N
Traes_1BL_5E492444E
Triticum aestivum
Traes_1BL_5E492444E
N
Si024486m.g
Setaria italica
Si024486m.g
N
Sb09g028790
Sorghum bicolor
Sb09g028790
N
OS05G0567600
Oryza sativa
OS05G0567600
N
ORUFI05G28020
Oryza rufipogon
ORUFI05G28020
N
ORGLA05G0226000
Oryza glaberrima
ORGLA05G0226000
N
BGIOSGA020378
Oryza indica
BGIOSGA020378
N
OMERI05G22790
Oryza meridionalis
OMERI05G22790
N
OMERI03G30200
Oryza meridionalis
OMERI03G30200
N
OGLUM05G27750
Oryza glumaepatula
OGLUM05G27750
N
OBART05G26130
Oryza barthii
OBART05G26130
N
OB05G33630
Oryza brachyantha
OB05G33630
N
MLOC_53626
Hordeum vulgare
MLOC_53626
N
GRMZM2G117497
Zea mays
GRMZM2G117497
N
F775_15149
Aegilops tauschii
F775_15149
N
F775_15026
Aegilops tauschii
F775_15026
N
BRADI2G16120
Brachypodium distachyon
BRADI2G16120
N