GLYMA07G01950 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA07G01950 T218779_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ATHB-15
M00864_2.00
Arabidopsis thaliana
AATAATTACT

AGTAATTATT
PBM
Franco-Zorrilla et al.(2014)
ICU4
0.867 1.000
ATHB-15
M06899_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
ATHB15_col_a
0.867 1.000
ATHB-9
M06898_2.00
Arabidopsis thaliana
DWWDRTAATGATKAH

DTMATCATTAYHWWH
Dap-seq
OMalley et al.(2016)
PHV_col_a
0.861 0.911
ATHB-9
M02682_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
SELEX
Mathelier et al.(2014)
MA0573.1
0.861 0.911
ATHB-9
M10623_2.00
Arabidopsis thaliana
HNHHGTAATGATTRCDYBS

SVRHGYAATCATTACDDND
Transfac
Matys et al.(2006)
P$ATHB9_01
0.861 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA07G01950.1 Homeodomain 16 75

Links

Other Homeodomain family TFs
Other Glycine max TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OPUNC05G23730 Oryza punctata OPUNC05G23730 N
Pavir.J28254 Panicum virgatum Pavir.J28254 N
Pavir.J09915 Panicum virgatum Pavir.J09915 N
Traes_1DL_10172C13A Triticum aestivum Traes_1DL_10172C13A N
Traes_1BL_B30884E0E Triticum aestivum Traes_1BL_B30884E0E N
Traes_1BL_5E492444E Triticum aestivum Traes_1BL_5E492444E N
Si024486m.g Setaria italica Si024486m.g N
Sb09g028790 Sorghum bicolor Sb09g028790 N
OS05G0567600 Oryza sativa OS05G0567600 N
ORUFI05G28020 Oryza rufipogon ORUFI05G28020 N
ORGLA05G0226000 Oryza glaberrima ORGLA05G0226000 N
BGIOSGA020378 Oryza indica BGIOSGA020378 N
OMERI05G22790 Oryza meridionalis OMERI05G22790 N
OMERI03G30200 Oryza meridionalis OMERI03G30200 N
OGLUM05G27750 Oryza glumaepatula OGLUM05G27750 N
OBART05G26130 Oryza barthii OBART05G26130 N
OB05G33630 Oryza brachyantha OB05G33630 N
MLOC_53626 Hordeum vulgare MLOC_53626 N
GRMZM2G117497 Zea mays GRMZM2G117497 N
F775_15149 Aegilops tauschii F775_15149 N
F775_15026 Aegilops tauschii F775_15026 N
BRADI2G16120 Brachypodium distachyon BRADI2G16120 N