GSMUA_Achr1G16280_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr1G16280_001 T219103_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HOX6
M02157_2.00 		Oryza sativa
DTGATTRVNN
NNBYAATCAH		 PBM
Weirauch et al.(2014)
pTH6378 		0.732 0.804
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr1P16280_001 Homeodomain 24 79

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HOX6 Oryza sativa OS09G0528200 D 0.732
F775_30991 Aegilops tauschii F775_30991 I 0.732
GSMUA_Achr1G18670_001 Musa acuminata GSMUA_Achr1G18670_001 I 0.648
LPERR09G05860 Leersia perrieri LPERR09G05860 I 0.611
LPERR09G13180 Leersia perrieri LPERR09G13180 I 0.732
MLOC_69710 Hordeum vulgare MLOC_69710 I 0.732
OB09G23870 Oryza brachyantha OB09G23870 I 0.732
OMERI09G12780 Oryza meridionalis OMERI09G12780 I 0.732
OPUNC09G15600 Oryza punctata OPUNC09G15600 I 0.732
Traes_5BL_9C32B27E2 Triticum aestivum Traes_5BL_9C32B27E2 I 0.732
Traes_5DL_96F9EED93 Triticum aestivum Traes_5DL_96F9EED93 I 0.732
TRIUR3_11780 Triticum urartu TRIUR3_11780 I 0.732
Eucgr.I02464 Eucalyptus grandis Eucgr.I02464 I 0.664
SapurV1A.0617s0090 Salix purpurea SapurV1A.0617s0090 I 0.611
SapurV1A.2485s0010 Salix purpurea SapurV1A.2485s0010 I 0.611