GSMUA_Achr8G02960_001 (Musa acuminata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GSMUA_Achr8G02960_001 T219221_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.866 0.929
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.866 0.929
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.866 0.929
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.861 0.893
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.861 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr8P02960_001 Homeodomain 4 63

Links

Other Homeodomain family TFs
Other Musa acuminata TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF454 Homo sapiens ENSG00000178187 D
Zfp454 Mus musculus ENSMUSG00000048728 I
ENSP00000326249 Macaca fascicularis ENSP00000326249 I
ENSBTAP00000016859-D1 Bos grunniens ENSBTAP00000016859-D1 I
ZNF454 Tursiops truncatus ENSTTRG00000012880 I
ZNF454 Tupaia belangeri ENSTBEG00000000346 I
Znf454 Rattus norvegicus ENSRNOG00000022971 I
ZNF454 Pteropus vampyrus ENSPVAG00000007676 I
ZNF454 Pan troglodytes ENSPTRG00000017611 I
ENSPANG00000009509 Papio anubis ENSPANG00000009509 I
ZNF454 Ochotona princeps ENSOPRG00000009035 I
ZNF454 Oryctolagus cuniculus ENSOCUG00000029119 I
ENSOARG00000004411 Ovis aries ENSOARG00000004411 I
ENSNLEG00000001430 Nomascus leucogenys ENSNLEG00000001430 I
ZNF454 Bos taurus ENSBTAG00000004262 I
ENSMPUG00000000725 Mustela putorius furo ENSMPUG00000000725 I
ENSMMUG00000008980 Macaca mulatta ENSMMUG00000008980 I
ZNF454 Myotis lucifugus ENSMLUG00000002894 I
ZNF454 Gorilla gorilla ENSGGOG00000022508 I
ZNF454 Felis catus ENSFCAG00000021971 I
ZNF454 Erinaceus europaeus ENSEEUG00000007684 I
ZNF454 Equus caballus ENSECAG00000005115 I
ENSCSAG00000008562 Chlorocebus sabaeus ENSCSAG00000008562 I
ZNF454 Callithrix jacchus ENSCJAG00000018857 I
ZNF454 Choloepus hoffmanni ENSCHOG00000002770 I
ZNF454 Canis familiaris ENSCAFG00000031168 I